RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 C15orf39Q6ZRI6 1047 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 APPL2Q8NEU8 664 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 CASP10Q92851 521 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 SENP8Q96LD8 212 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 KLHL5Q96PQ7 755 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 SRRTQ9BXP5 876 aaKnown RBP28.84■■■□□ 2.21
CCM2-211ENST00000478582 EMILIN2Q9BXX0 1053 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 ANO10Q9NW15 660 aa28.84■■■□□ 2.21
CCM2-211ENST00000478582 ARMCX3Q9UH62 379 aaPredicted RBP28.84■■■□□ 2.21
CCM2-211ENST00000478582 R3HCC1Q9Y3T6 440 aaKnown RBP28.84■■■□□ 2.21
CCM2-211ENST00000478582 ARHGEF37A1IGU5 675 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 KPNA7A9QM74 516 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 C2CD2LO14523 706 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 LETM1O95202 739 aaPredicted RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 GNA14O95837 355 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 CST3P01034 146 aaPredicted RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 CNPP09543 421 aaKnown RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 GTF2H1P32780 548 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 MRPL58Q14197 206 aaKnown RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 ZACNQ401N2 412 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 TDRD10Q5VZ19 366 aaKnown RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 ANKS3Q6ZW76 656 aa28.83■■■□□ 2.21
CCM2-211ENST00000478582 USP15Q9Y4E8 981 aaPredicted RBP28.83■■■□□ 2.21
CCM2-211ENST00000478582 C19orf67A6NJJ6 358 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 STX10O60499 249 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 HOXB8P17481 243 aaPredicted RBP28.82■■■□□ 2.2
CCM2-211ENST00000478582 TYMPP19971 482 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 MARSP56192 900 aaKnown RBP28.82■■■□□ 2.2
CCM2-211ENST00000478582 MYO1EQ12965 1108 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 STX1AQ16623 288 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 SYCE2Q6PIF2 218 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 PRSS55Q6UWB4 352 aaPredicted RBP28.82■■■□□ 2.2
CCM2-211ENST00000478582 SV2AQ7L0J3 742 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 S1PR5Q9H228 398 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 GDAP2Q9NXN4 497 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 BACE2Q9Y5Z0 518 aa28.82■■■□□ 2.2
CCM2-211ENST00000478582 STAU1O95793 577 aaKnown RBP28.81■■■□□ 2.2
CCM2-211ENST00000478582 C1RP00736 705 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 CYP11A1P05108 521 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 TRIM49P0CI25 452 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 TRIM49CP0CI26 452 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 PPP3CAQ08209 521 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 PSMD5Q16401 504 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 VARS2Q5ST30 1063 aaKnown RBP28.81■■■□□ 2.2
CCM2-211ENST00000478582 HPDLQ96IR7 371 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 MTRRQ9UBK8 725 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 SCN1AP35498 2009 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 VWA8A3KMH1 1905 aa28.81■■■□□ 2.2
CCM2-211ENST00000478582 H7C4K7 107 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 CYB561D2O14569 222 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 TEX28O15482 410 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 TBC1D4O60343 1298 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 PHACTR2O75167 634 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 OAZ2O95190 189 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 ODC1P11926 461 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 ATICP31939 592 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 BIRC3Q13489 604 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 TRPC3Q13507 836 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 CCDC40Q4G0X9 1142 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 PPFIBP1Q86W92 1011 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 TMEM8AQ9HCN3 771 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 DSEQ9UL01 958 aa28.8■■■□□ 2.2
CCM2-211ENST00000478582 VNN1O95497 513 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 GCLMP48507 274 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 NFKBIBQ15653 356 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 SLC22A17Q8WUG5 538 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 SUSD6Q92537 303 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 KHSRPQ92945 711 aaKnown RBP eCLIP28.79■■■□□ 2.2
CCM2-211ENST00000478582 SLC35C1Q96A29 364 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 CLSTN3Q9BQT9 956 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 OXCT2Q9BYC2 517 aaPredicted RBP28.79■■■□□ 2.2
CCM2-211ENST00000478582 XYLT2Q9H1B5 865 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 VRTNQ9H8Y1 702 aa28.79■■■□□ 2.2
CCM2-211ENST00000478582 ADH1AP07327 375 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 KLRC2P26717 231 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 TYRO3Q06418 890 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 NCOA4Q13772 614 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 KRT39Q6A163 491 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 LIMS2Q7Z4I7 341 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 ENOX1Q8TC92 643 aaKnown RBP28.78■■■□□ 2.2
CCM2-211ENST00000478582 EPHX3Q9H6B9 360 aa28.78■■■□□ 2.2
CCM2-211ENST00000478582 CCDC192P0DO97 292 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 MYL6P60660 151 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 YWHAHQ04917 246 aaPredicted RBP28.77■■■□□ 2.2
CCM2-211ENST00000478582 DPH6Q7L8W6 267 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 IRF2BP1Q8IU81 584 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 TRIM59Q8IWR1 403 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 THAP9Q9H5L6 903 aa28.77■■■□□ 2.2
CCM2-211ENST00000478582 TIMM13Q9Y5L4 95 aaPredicted RBP28.77■■■□□ 2.2
CCM2-211ENST00000478582 PI4K2BG5E9Z4 385 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 EPCAMP16422 314 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 RPL17P18621 184 aaKnown RBP28.76■■■□□ 2.19
CCM2-211ENST00000478582 CLCN4P51793 760 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 TPD52L1Q16890 204 aaPredicted RBP28.76■■■□□ 2.19
CCM2-211ENST00000478582 SGSM1Q2NKQ1 1148 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 DCAF17Q5H9S7 520 aaPredicted RBP28.76■■■□□ 2.19
CCM2-211ENST00000478582 TCERG1LQ5VWI1 586 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 SLC8B1Q6J4K2 584 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 ZNF280DQ6N043 979 aa28.76■■■□□ 2.19
CCM2-211ENST00000478582 C11orf57Q6ZUT1 292 aaPredicted RBP28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms