RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 CLCA2Q9UQC9 943 aa6.02□□□□□ -1.45
VPS50-214ENST00000477935 SIK3Q9Y2K2 1263 aa6.02□□□□□ -1.45
VPS50-214ENST00000477935 NOP58Q9Y2X3 529 aaKnown RBP6.02□□□□□ -1.45
VPS50-214ENST00000477935 NSD2O96028 1365 aa6.02□□□□□ -1.45
VPS50-214ENST00000477935 ADGRB1O14514 1584 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 TNKSO95271 1327 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 TTC21AQ8NDW8 1320 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 KLHL33A6NCF5 533 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 FAM171A2A8MVW0 826 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 CA12O43570 354 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 XPOTO43592 962 aaKnown RBP6.01□□□□□ -1.45
VPS50-214ENST00000477935 FAM20BO75063 409 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 FZD7O75084 574 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 NDUFS2O75306 463 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 ALOX15P16050 662 aaPredicted RBP6.01□□□□□ -1.45
VPS50-214ENST00000477935 C5AR1P21730 350 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 GUCY1A2P33402 732 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 SLC6A9P48067 706 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 SLC25A3Q00325 362 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 SP140Q13342 867 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 PCBP2Q15366 365 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS50-214ENST00000477935 BMT2Q1RMZ1 405 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 DRICH1Q6PGQ1 229 aaPredicted RBP6.01□□□□□ -1.45
VPS50-214ENST00000477935 SLC35B2Q8TB61 432 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 NRG4Q8WWG1 115 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 SMAD5Q99717 465 aaKnown RBP6.01□□□□□ -1.45
VPS50-214ENST00000477935 NDC1Q9BTX1 674 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 LDAHQ9H6V9 325 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 SORCS3Q9UPU3 1222 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 MRFAP1Q9Y605 127 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 ATRNL1Q5VV63 1379 aa6.01□□□□□ -1.45
VPS50-214ENST00000477935 TNRC6CQ9HCJ0 1690 aaKnown RBP6.01□□□□□ -1.45
VPS50-214ENST00000477935 CGNL1Q0VF96 1302 aa6□□□□□ -1.45
VPS50-214ENST00000477935 TTC21BQ7Z4L5 1316 aa6□□□□□ -1.45
VPS50-214ENST00000477935 PASKQ96RG2 1323 aa6□□□□□ -1.45
VPS50-214ENST00000477935 WNK3Q9BYP7 1800 aa6□□□□□ -1.45
VPS50-214ENST00000477935 CXorf49A8MYA2 514 aaPredicted RBP6□□□□□ -1.45
VPS50-214ENST00000477935 PJA2O43164 708 aa6□□□□□ -1.45
VPS50-214ENST00000477935 PTPN21Q16825 1174 aa6□□□□□ -1.45
VPS50-214ENST00000477935 AFMIDQ63HM1 303 aa6□□□□□ -1.45
VPS50-214ENST00000477935 SYT12Q8IV01 421 aa6□□□□□ -1.45
VPS50-214ENST00000477935 RPUSD2Q8IZ73 545 aaKnown RBP6□□□□□ -1.45
VPS50-214ENST00000477935 TFAP2CQ92754 450 aa6□□□□□ -1.45
VPS50-214ENST00000477935 DPF2Q92785 391 aa6□□□□□ -1.45
VPS50-214ENST00000477935 TEKT5Q96M29 485 aa6□□□□□ -1.45
VPS50-214ENST00000477935 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
VPS50-214ENST00000477935 EIF2B4Q9UI10 523 aaKnown RBP6□□□□□ -1.45
VPS50-214ENST00000477935 AJAP1Q9UKB5 411 aaPredicted RBP6□□□□□ -1.45
VPS50-214ENST00000477935 INTUQ9ULD6 942 aa6□□□□□ -1.45
VPS50-214ENST00000477935 TNRC18O15417 2968 aaPredicted RBP6□□□□□ -1.45
VPS50-214ENST00000477935 WDR33Q9C0J8 1336 aaKnown RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 TUBGCP6Q96RT7 1819 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 PALLDQ8WX93 1383 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 LEFTY2O00292 366 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 NARSO43776 548 aaKnown RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 RECQL4O94761 1208 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 PEX11BO96011 259 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 SNRPA1P09661 255 aaKnown RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 APOBEC3AP31941 199 aaPredicted RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 WASP42768 502 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 PTTG1IPP53801 180 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 BRDTQ58F21 947 aaPredicted RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 FNDC7Q5VTL7 733 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 EFCAB12Q6NXP0 572 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 SMIM5Q71RC9 77 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 PNMA8AQ86V59 439 aaPredicted RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 RNF169Q8NCN4 708 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 OR10H5Q8NGA6 315 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 STON2Q8WXE9 905 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 CYFIP2Q96F07 1278 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 SLC13A1Q9BZW2 595 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 LY75O60449 1722 aa5.99□□□□□ -1.45
VPS50-214ENST00000477935 KDM6AO15550 1401 aaPredicted RBP5.99□□□□□ -1.45
VPS50-214ENST00000477935 PIK3C2AO00443 1686 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 TRIM24O15164 1050 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 GPR32O75388 356 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 SCAF4O95104 1147 aaKnown RBP5.98□□□□□ -1.45
VPS50-214ENST00000477935 ZNF202O95125 648 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 FSHBP01225 129 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 FPR1P21462 350 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 MGAT1P26572 445 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 PCSK1P29120 753 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 MAP2K2P36507 400 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 ACVRL1P37023 503 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 ALDH1A3P47895 512 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 SLC16A1P53985 500 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 CLRN1P58418 232 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 RRP12Q5JTH9 1297 aaKnown RBP5.98□□□□□ -1.45
VPS50-214ENST00000477935 ZFP28Q8NHY6 868 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 CPT1CQ8TCG5 803 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 CCHCR1Q8TD31 782 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 SLC25A43Q8WUT9 341 aaPredicted RBP5.98□□□□□ -1.45
VPS50-214ENST00000477935 CASKIN2Q8WXE0 1202 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 C7orf25Q9BPX7 421 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 MRI1Q9BV20 369 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 SCAND2PQ9GZW5 306 aaPredicted RBP5.98□□□□□ -1.45
VPS50-214ENST00000477935 TMPRSS5Q9H3S3 457 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 MANSC1Q9H8J5 431 aa5.98□□□□□ -1.45
VPS50-214ENST00000477935 SLC2A4RGQ9NR83 387 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms