RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 GTF3C4Q9UKN8 822 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 DEUP1Q05D60 604 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 SPIRE1Q08AE8 756 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.18□□□□□ -0.14
DFFB-209ENST00000477548 LMO3Q8TAP4 145 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 EPS8L1Q8TE68 723 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 SPIRE2Q8WWL2 714 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 KAT5Q92993 513 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 ANAPC7Q9UJX3 599 aa14.18□□□□□ -0.14
DFFB-209ENST00000477548 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
DFFB-209ENST00000477548 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.18□□□□□ -0.14
DFFB-209ENST00000477548 EMSYQ7Z589 1322 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 IRS2Q9Y4H2 1338 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 hCG_2014768A0A024R1R8 64 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 USP17L10C9JJH3 530 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 CIB2O75838 187 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 LDHCP07864 332 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 MAPK4P31152 587 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 PRR5LQ6MZQ0 368 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 SPATA24Q86W54 205 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 NAT14Q8WUY8 206 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 PPP2R3CQ969Q6 453 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 TMEM120AQ9BXJ8 343 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 RHBDL2Q9NX52 303 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 NEU2Q9Y3R4 380 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 A6NJR5 290 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 CYP26A1O43174 497 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 HNRNPRO43390 633 aaKnown RBP14.17□□□□□ -0.14
DFFB-209ENST00000477548 PPP4CP60510 307 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 AP2B1P63010 937 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 CDK16Q00536 496 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 FOXD4Q12950 439 aaPredicted RBP14.17□□□□□ -0.14
DFFB-209ENST00000477548 RINT1Q6NUQ1 792 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 WDR66Q8TBY9 1149 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 CCDC110Q8TBZ0 833 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
DFFB-209ENST00000477548 ANKRD2Q9GZV1 360 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 MANSC1Q9H8J5 431 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 MTMR4Q9NYA4 1195 aa14.17□□□□□ -0.14
DFFB-209ENST00000477548 MTO1Q9Y2Z2 717 aaKnown RBP14.17□□□□□ -0.14
DFFB-209ENST00000477548 PIK3CDO00329 1044 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 ZBTB5O15062 677 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 RNASEH1O60930 286 aaKnown RBP14.16□□□□□ -0.14
DFFB-209ENST00000477548 RARBP10826 455 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 RALAP11233 206 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 BTDP43251 543 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 CENPCQ03188 943 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 FASTKD3Q14CZ7 662 aaKnown RBP14.16□□□□□ -0.14
DFFB-209ENST00000477548 NFIL3Q16649 462 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.16□□□□□ -0.14
DFFB-209ENST00000477548 SH2D4BQ5SQS7 431 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 DPY19L2Q6NUT2 758 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 CCDC174Q6PII3 467 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 PHLDB2Q86SQ0 1253 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 SLC47A2Q86VL8 602 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 VTI1AQ96AJ9 217 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 TSSK1BQ9BXA7 367 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 PSMC3IPQ9P2W1 217 aaPredicted RBP14.16□□□□□ -0.14
DFFB-209ENST00000477548 B2RBV5 119 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 GCLMP48507 274 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 DLG4P78352 724 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 CDC16Q13042 620 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 LRRC6Q86X45 466 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 ETNPPLQ8TBG4 499 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 FOXP3Q9BZS1 431 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 C12orf65Q9H3J6 166 aaKnown RBP14.16□□□□□ -0.14
DFFB-209ENST00000477548 PARVGQ9HBI0 331 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 ARMCX1Q9P291 453 aa14.16□□□□□ -0.14
DFFB-209ENST00000477548 NOCTQ9UK39 431 aaKnown RBP14.16□□□□□ -0.14
DFFB-209ENST00000477548 H3BRJ5 948 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 VAV1P15498 845 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 DESP17661 470 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 INHBCP55103 352 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 RASA3Q14644 834 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 KRT72Q14CN4 511 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 STXBP4Q6ZWJ1 553 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 TTC7BQ86TV6 843 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 FAM178BQ8IXR5 827 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 SKA1Q96BD8 255 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 NMD3Q96D46 503 aaKnown RBP14.15□□□□□ -0.14
DFFB-209ENST00000477548 SLX1AQ9BQ83 275 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 C2orf71A6NGG8 1288 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 F8W8V4 182 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 GOLGA8RI6L899 631 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 DNAJC6O75061 913 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 USP1O94782 785 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 GYS1P13807 737 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 GPSM2P81274 684 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 ARHGAP4P98171 946 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 FMO1Q01740 532 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 DBN1Q16643 649 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 RIPOR1Q6ZS17 1223 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 ZBED8Q8IZ13 594 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 PPM1KQ8N3J5 372 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 TCP10LQ8TDR4 215 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 MPP4Q96JB8 637 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 EBF3Q9H4W6 596 aa14.15□□□□□ -0.14
DFFB-209ENST00000477548 DMAC2Q9NW81 257 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms