RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ABRAQ8N0Z2 381 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 MAML1Q92585 1016 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 PURBQ96QR8 312 aaKnown RBP15.41■□□□□ 0.06
HDAC6-220ENST00000477528 TLK1Q9UKI8 766 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 NCANO14594 1321 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 FAM47DPA6NHR8 397 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 TLR2O60603 784 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 NOL4O94818 638 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 PSMD6Q15008 389 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 R3HDM1Q15032 1099 aaKnown RBP15.41■□□□□ 0.06
HDAC6-220ENST00000477528 SPOPLQ6IQ16 392 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 SH3BP5LQ7L8J4 393 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 TMC3Q7Z5M5 1100 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 CRLF3Q8IUI8 442 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 OR6J1Q8NGC5 347 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 EXD1Q8NHP7 514 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 KLHL8Q9P2G9 620 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-220ENST00000477528 PSMC3IPQ9P2W1 217 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-220ENST00000477528 PCDHA3Q9Y5H8 950 aa15.41■□□□□ 0.06
HDAC6-220ENST00000477528 LSM8O95777 96 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 SESN3P58005 492 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 IRX4P78413 519 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 NFIL3Q16649 462 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 CYP4A22Q5TCH4 519 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 NXNQ6DKJ4 435 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 METTL7BQ6UX53 244 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 MDM1Q8TC05 714 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 TNIP3Q96KP6 325 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 IPO11Q9UI26 975 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 USP15Q9Y4E8 981 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 LUC7L3O95232 432 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 MYBL2P10244 700 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 TGFB3P10600 412 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 EPS8L1Q8TE68 723 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 MID2Q9UJV3 735 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 SYF2O95926 243 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 C1QBPQ07021 282 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 DNAJC18Q9H819 358 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 CFAP69A5D8W1 941 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 RGS7P49802 495 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 MCL1Q07820 350 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 IL31RAQ8NI17 732 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 VCX3BQ9H321 246 aa15.4■□□□□ 0.06
HDAC6-220ENST00000477528 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-220ENST00000477528 CAND2O75155 1236 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 PYGMP11217 842 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 HSD17B4P51659 736 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 MRPS9P82933 396 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 CCNG2Q16589 344 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ICE2Q659A1 982 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 RAB3IL1Q8TBN0 382 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ECT2Q9H8V3 914 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ZFP69BQ9UJL9 534 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 KCNN4O15554 427 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 SLC26A2P50443 739 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 EPS8L3Q8TE67 593 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 VCPIP1Q96JH7 1222 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 TAS2R14Q9NYV8 317 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 PIK3R2O00459 728 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 LYPLA2O95372 231 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ITGB3P05106 788 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 GPD1P21695 349 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ASPHQ12797 758 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 EFHC2Q5JST6 749 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 CDR2LQ86X02 465 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 TMEM161BQ8NDZ6 487 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 MICAL1Q8TDZ2 1067 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 RAPGEF5Q92565 580 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 ALKBH8Q96BT7 664 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 MBOAT7Q96N66 472 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 A1CFQ9NQ94 594 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 METTL5Q9NRN9 209 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 KLC4Q9NSK0 619 aa15.39■□□□□ 0.05
HDAC6-220ENST00000477528 XPO7Q9UIA9 1087 aaKnown RBP15.39■□□□□ 0.05
HDAC6-220ENST00000477528 H3BRJ5 948 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 BAG2O95816 211 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 RBP3P10745 1247 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 SMTNL2Q2TAL5 461 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 ERO1BQ86YB8 467 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 MREGQ8N565 214 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 SPATA18Q8TC71 538 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 KAT5Q92993 513 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 FRMD8P1Q9BZ68 369 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-220ENST00000477528 CCDC160A6NGH7 325 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 PARP9Q8IXQ6 854 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 MTFR1LQ9H019 292 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 CDC42EP4Q9H3Q1 356 aaKnown RBP15.38■□□□□ 0.05
HDAC6-220ENST00000477528 CISHQ9NSE2 258 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-220ENST00000477528 CREB3O43889 395 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 ADRB2P07550 413 aa15.38■□□□□ 0.05
HDAC6-220ENST00000477528 NLRP11P59045 1033 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms