RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 ROR1Q01973 937 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 LRRC63Q05C16 580 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 GPR17Q13304 367 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 PNOCQ13519 176 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 STIM1Q13586 685 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 CLUL1Q15846 466 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 CENPPQ6IPU0 288 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 INTS8Q75QN2 995 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 ZDHHC14Q8IZN3 488 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 THEM5Q8N1Q8 247 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 TOP6BLQ8N6T0 577 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 TRIML1Q8N9V2 468 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 ZSWIM2Q8NEG5 633 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 PARD3BQ8TEW8 1205 aa13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 WDR6Q9NNW5 1121 aaKnown RBP13.32□□□□□ -0.28
CLCNKA-205ENST00000477360 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 CCDC195A0A1B0GUA6 201 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 CYB561D2O14569 222 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 PPEF2O14830 753 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 ITGB3P05106 788 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 C8AP07357 584 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 ALADP13716 330 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 RPL17P18621 184 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 NR2F2P24468 414 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 POLR2BP30876 1174 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 WNT7BP56706 349 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 PPM1LQ5SGD2 360 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 RSPO2Q6UXX9 243 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 OTOP3Q7RTS5 596 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 TRAPPC11Q7Z392 1133 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 TAF4BQ92750 862 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 ZNF707Q96C28 371 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 DHTKD1Q96HY7 919 aaPredicted RBP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 MTMR12Q9C0I1 747 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
CLCNKA-205ENST00000477360 ANK1P16157 1881 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 WDR27A2RRH5 827 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 PSMA7O14818 248 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ADAM12O43184 909 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 HUS1O60921 280 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 MICAL2O94851 1124 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 TNNI1P19237 187 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ELF1P32519 619 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 GTF2H1P32780 548 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 PSMC2P35998 433 aaKnown RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 LHX1P48742 406 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 PLD1Q13393 1074 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 TMC5Q6UXY8 1006 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ADSSL1Q8N142 457 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 CSGALNACT2Q8N6G5 542 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 LEMD2Q8NC56 503 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 NXPE3Q969Y0 559 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ACSF2Q96CM8 615 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 HPDLQ96IR7 371 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 FAXDC2Q96IV6 333 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 ACBD6Q9BR61 282 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 GZF1Q9H116 711 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 POMKQ9H5K3 350 aa13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 FAM124BQ9H5Z6 455 aaPredicted RBP13.3□□□□□ -0.28
CLCNKA-205ENST00000477360 GABRDO14764 452 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 CETN3O15182 167 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 STX10O60499 249 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 DLATP10515 647 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 PCSK1P29120 753 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 PRCPP42785 496 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 FKBP3Q00688 224 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 ADAM9Q13443 819 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 NFE2Q16621 373 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 SKOR2Q2VWA4 1001 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 DCP1BQ8IZD4 617 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 C12orf76Q8N812 135 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 RDH13Q8NBN7 331 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 OR5B17Q8NGF7 314 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 SLC7A14Q8TBB6 771 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 SYAP1Q96A49 352 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 CEP295NLQ96MC4 621 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 TSG101Q99816 390 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 ZCWPW1Q9H0M4 648 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 ABCB6Q9NP58 842 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 ASB3Q9Y575 518 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 PTPRJQ12913 1337 aa13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 MTCL1Q9Y4B5 1905 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-205ENST00000477360 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 PRRG1O14668 218 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 TACC1O75410 805 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 RFPL2O75678 378 aa13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 C4BPAP04003 597 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-205ENST00000477360 KRT13P13646 458 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms