RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 PARVBQ9HBI1 364 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 AGPAT3Q9NRZ7 376 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 NMRK1Q9NWW6 199 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LARSQ9P2J5 1176 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CRNNQ9UBG3 495 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ADAM21Q9UKJ8 722 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CAB39Q9Y376 341 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ACOD1A6NK06 481 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 E9PMD0 336 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 H7C0S8 307 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 KPNA5O15131 536 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 KMOO15229 486 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 KRT86O43790 486 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MAFO75444 373 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 NPTXRO95502 500 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 STAU1O95793 577 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ACAA1P09110 424 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ATP4AP20648 1035 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SERPINB6P35237 376 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CAP1Q01518 475 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CYLC2Q14093 348 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 EFR3AQ14156 821 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MAP3K11Q16584 847 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LRIT3Q3SXY7 679 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 XKR9Q5GH70 373 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 DRICH1Q6PGQ1 229 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 LRIG3Q6UXM1 1119 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 KDM7AQ6ZMT4 941 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 GPR155Q7Z3F1 870 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TXNRD3Q86VQ6 643 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM186BQ8IYM0 893 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 SYCE1Q8N0S2 351 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 OR52K1Q8NGK4 314 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TRPM4Q8TD43 1214 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TSPEARQ8WU66 669 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ASB12Q8WXK4 309 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TUBGCP3Q96CW5 907 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 XAGE2Q96GT9 111 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 PKP4Q99569 1192 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 MNTQ99583 582 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 EDEM2Q9BV94 578 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 CARD6Q9BX69 1037 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 TDRD1Q9BXT4 1180 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 FRMD8Q9BZ67 464 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 EURLQ9NYK6 297 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ZSWIM5Q9P217 1185 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 C19orf53Q9UNZ5 99 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 RRP7AQ9Y3A4 280 aaKnown RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 PHLPP2Q6ZVD8 1323 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 AATKQ6ZMQ8 1374 aa6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
SPTLC3-205ENST00000476791 ABCC8Q09428 1581 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 A6NHS1 94 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 PDPK1O15530 556 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC22A3O75751 556 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 DNAJB5O75953 348 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 PRPF6O94906 941 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ALBP02768 609 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ITGB1P05556 798 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 EZRP15311 586 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 RPS6KB1P23443 525 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 DHPSP49366 369 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 RNF144AP50876 292 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ADCY7P51828 1080 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ASPHQ12797 758 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 COL9A2Q14055 689 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 WDR43Q15061 677 aaKnown RBP eCLIP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 KLHL38Q2WGJ6 581 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ATL3Q6DD88 541 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC30A6Q6NXT4 461 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 OGFOD3Q6PK18 319 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 RANBP10Q6VN20 620 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ERICH1Q86X53 443 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 P3H2Q8IVL5 708 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ZNF654Q8IZM8 581 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NIPA2Q8N8Q9 360 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SCAIQ8N9R8 606 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CCDC63Q8NA47 563 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NSUN7Q8NE18 718 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 OR6S1Q8NH40 331 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CALML6Q8TD86 181 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CENPIQ92674 756 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 HDAC2Q92769 488 aaKnown RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 EXT2Q93063 718 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 SLC22A18Q96BI1 424 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 EFHD2Q96C19 240 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM89AQ96GI7 184 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ACSBG1Q96GR2 724 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 CAMK1GQ96NX5 476 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 NT5C1BQ96P26 610 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 TTC1Q99614 292 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 TM9SF3Q9HD45 589 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ABI2Q9NYB9 513 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 TBC1D29Q9UFV1 150 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 ZFP37Q9Y6Q3 630 aaPredicted RBP6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 C1orf232A0A0U1RR37 186 aa6.31□□□□□ -1.4
SPTLC3-205ENST00000476791 FAM237AA0A1B0GTK4 181 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms