RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 VDRP11473 427 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ATP1A3P13637 1013 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 PI3P19957 117 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 FPR1P21462 350 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 FGFR2P21802 821 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CASRP41180 1078 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 LIFRP42702 1097 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 NAP1L1P55209 391 aaKnown RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ATP2C1P98194 919 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CREMQ03060 361 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ATP2B3Q16720 1220 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ADCK5Q3MIX3 580 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ALDH1L2Q3SY69 923 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 SLC45A4Q5BKX6 768 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ZMAT1Q5H9K5 638 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TSHZ3Q63HK5 1081 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 DSTYKQ6XUX3 929 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 USP30Q70CQ3 517 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 BEND5Q7L4P6 421 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ZNF572Q7Z3I7 529 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 LRRTM4Q86VH4 590 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 PPP1R3BQ86XI6 285 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TMTC1Q8IUR5 882 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 KLHL36Q8N4N3 616 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CELF5Q8N6W0 485 aaKnown RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 ANKRD53Q8N9V6 530 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 OR14K1Q8NGZ2 314 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CXorf38Q8TB03 319 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 IPO4Q8TEX9 1081 aaKnown RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 SUCLG2Q96I99 432 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 PYM1Q9BRP8 204 aaKnown RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 CHCHD6Q9BRQ6 235 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 AP1M1Q9BXS5 423 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 SLC6A15Q9H2J7 730 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 PIH1D1Q9NWS0 290 aaKnown RBP4.82□□□□□ -1.64
VPS13D-207ENST00000476169 MOCS1Q9NZB8 636 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 NCDNQ9UBB6 729 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 MAN2B2Q9Y2E5 1009 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TMEM98Q9Y2Y6 226 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TMX2Q9Y320 296 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 TTLL3Q9Y4R7 772 aa4.82□□□□□ -1.64
VPS13D-207ENST00000476169 FSD2A1L4K1 749 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 IPO5O00410 1097 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 NPC1O15118 1278 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 THAP12O43422 761 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SOAT2O75908 522 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 RAP2AP10114 183 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 CKMT1AP12532 417 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ALOX15P16050 662 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 PRDX5P30044 214 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SERPINF1P36955 418 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 PIK3CGP48736 1102 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 DLX2Q07687 328 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SP140Q13342 867 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SPARCL1Q14515 664 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SSPNQ14714 243 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ACAP1Q15027 740 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 WDR45BQ5MNZ6 344 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 GPATCH4Q5T3I0 446 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 MCTP2Q6DN12 878 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SULT6B1Q6IMI4 303 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 TMCO3Q6UWJ1 677 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 KRT77Q7Z794 578 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 RALYLQ86SE5 291 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 DCBLD1Q8N8Z6 715 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 OR5M3Q8NGP4 307 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 LRRC46Q96FV0 321 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 RPL10LQ96L21 214 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 MRGPRX1Q96LB2 322 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SDF4Q9BRK5 362 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 C1orf43Q9BWL3 253 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 C11orf54Q9H0W9 315 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 MRPL46Q9H2W6 279 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 PRKRIP1Q9H875 184 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 OLA1Q9NTK5 396 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 MYO1AQ9UBC5 1043 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 AASSQ9UDR5 926 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ADAM29Q9UKF5 820 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SLC13A4Q9UKG4 626 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 JAG2Q9Y219 1238 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 ZDHHC9Q9Y397 364 aa4.81□□□□□ -1.64
VPS13D-207ENST00000476169 SETD1BQ9UPS6 1966 aaKnown RBP4.81□□□□□ -1.64
VPS13D-207ENST00000476169 B4E171 279 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TISP43B9A030 160 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 B9A039 149 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 WNT10BO00744 389 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 HNRNPDLO14979 420 aaKnown RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 SASH1O94885 1247 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 AHSGP02765 367 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 EN2P19622 333 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-207ENST00000476169 GLDCP23378 1020 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 TSPAN7P41732 249 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 RAD52P43351 418 aa4.8□□□□□ -1.64
VPS13D-207ENST00000476169 KCNJ5P48544 419 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 1106.2 ms