RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 ODR4Q5SWX8 454 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 TMEM63BQ5T3F8 832 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF648Q5T619 568 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ZNF618Q5T7W0 954 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 OVOS1Q6IE37 1185 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 APOA5Q6Q788 366 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 TSHZ1Q6ZSZ6 1077 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 HEATR3Q7Z4Q2 680 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 FANCBQ8NB91 859 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ENOX1Q8TC92 643 aaKnown RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 BICD2Q8TD16 824 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 LMBR1Q8WVP7 490 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 UBXN4Q92575 508 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 PPP2R3CQ969Q6 453 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 SDF4Q9BRK5 362 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 C11orf84Q9BUA3 381 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 FTHL17Q9BXU8 183 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 HDAC8Q9BY41 377 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 IFIH1Q9BYX4 1025 aaKnown RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 LMAN2LQ9H0V9 348 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 SMARCAD1Q9H4L7 1026 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 AZI2Q9H6S1 392 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 TTC12Q9H892 705 aaPredicted RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 BRMS1Q9HCU9 246 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 METTL5Q9NRN9 209 aaKnown RBP4.73□□□□□ -1.65
VPS13D-206ENST00000476045 SLAMF8Q9P0V8 285 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 KLHL3Q9UH77 587 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 DUSP13Q9UII6 198 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 PCDHB14Q9Y5E9 798 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 ATP6V1DQ9Y5K8 247 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 MTCH2Q9Y6C9 303 aa4.73□□□□□ -1.65
VPS13D-206ENST00000476045 KDM3AQ9Y4C1 1321 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SHISA3A0PJX4 238 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 LINC01553A4QN01 128 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GOLGA8AA7E2F4 631 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GOLGA8BA8MQT2 603 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 WASH4PA8MWX3 477 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 C5orf67F2Z3F1 127 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 TNFRSF10CO14798 259 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 AP5Z1O43299 807 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 LRRN2O75325 713 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 PLEKHA8P1O95397 391 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 KRT1P04264 644 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 RB1P06400 928 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 TCF7P36402 384 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SREBF1P36956 1147 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 RNF4P78317 190 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 KRT85P78386 507 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 ADAM17P78536 824 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 DEFB103AP81534 67 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 FANCCQ00597 558 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 TEKQ02763 1124 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GRB10Q13322 594 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 TOB2Q14106 344 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 ANKRD1Q15327 319 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 CAMK4Q16566 473 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 CEP55Q53EZ4 464 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 DNTTIP2Q5QJE6 756 aaKnown RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 WWC2Q6AWC2 1192 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SASS6Q6UVJ0 657 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SMAP1Q8IYB5 467 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 MYOCDQ8IZQ8 938 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 FBXL16Q8N461 479 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SRBD1Q8N5C6 995 aaKnown RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SPC24Q8NBT2 197 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 PDZD8Q8NEN9 1154 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GDPD5Q8WTR4 605 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 UBE2Q2Q8WVN8 375 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 ARNTL2Q8WYA1 636 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SEPT1Q8WYJ6 367 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 TBC1D5Q92609 795 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GLG1Q92896 1179 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 MRPL38Q96DV4 380 aaKnown RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 LIN37Q96GY3 246 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 FAM167AQ96KS9 214 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 NEK1Q96PY6 1258 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 YME1L1Q96TA2 773 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 MYL10Q9BUA6 226 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 G6PC3Q9BUM1 346 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 C1QTNF1Q9BXJ1 281 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 LRRC2Q9BYS8 371 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 ANO3Q9BYT9 981 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 RIC8AQ9NPQ8 531 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 JADE2Q9NQC1 790 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 BARHL2Q9NY43 387 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 SLC9A2Q9UBY0 812 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GGT7Q9UJ14 662 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 NAP1L2Q9ULW6 460 aaPredicted RBP4.72□□□□□ -1.65
VPS13D-206ENST00000476045 UBIAD1Q9Y5Z9 338 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 PLXNA4Q9HCM2 1894 aa4.72□□□□□ -1.65
VPS13D-206ENST00000476045 GOLGA6L4A6NEF3 574 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 DBX1A6NMT0 343 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 STXBP3O00186 592 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 LPXNO60711 386 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 STAG3L1P0CL83 205 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 MYOGP15173 224 aa4.71□□□□□ -1.66
VPS13D-206ENST00000476045 PDCP20941 246 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms