RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
SMC5-203ENST00000475540 IL12RB1P42701 662 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 PHKA1P46020 1223 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 RPS7P62081 194 aaKnown RBP8.17□□□□□ -1.1
SMC5-203ENST00000475540 POU6F2P78424 691 aaPredicted RBP8.17□□□□□ -1.1
SMC5-203ENST00000475540 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMC5-203ENST00000475540 KIF22Q14807 665 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 GEN1Q17RS7 908 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 SLC35G2Q8TBE7 412 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 DIS3LQ8TF46 1054 aaKnown RBP8.17□□□□□ -1.1
SMC5-203ENST00000475540 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 TRIB1Q96RU8 372 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 CGRRF1Q99675 332 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 TCEAL9Q9UHQ7 104 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 DMTF1Q9Y222 760 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
SMC5-203ENST00000475540 EPN1Q9Y6I3 576 aaPredicted RBP8.17□□□□□ -1.1
SMC5-203ENST00000475540 PRSS29PA6NIE9 313 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 POLRMTO00411 1230 aaKnown RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 CHEK2O96017 543 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 GNAI2P04899 355 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 RARBP10826 455 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 NKX6-1P78426 367 aaPredicted RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 DYRK1AQ13627 763 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 PLS1Q14651 629 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 RAVER1Q8IY67 606 aaKnown RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 CHPFQ8IZ52 775 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 BRIX1Q8TDN6 353 aaKnown RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 MTFMTQ96DP5 389 aaKnown RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 SLC35A4Q96G79 324 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 SLITRK6Q9H5Y7 841 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 GPR35Q9HC97 309 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 VSX1Q9NZR4 365 aaPredicted RBP8.16□□□□□ -1.1
SMC5-203ENST00000475540 CTTNBP2NLQ9P2B4 639 aa8.16□□□□□ -1.1
SMC5-203ENST00000475540 E9PLN8 166 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 TOR1BO14657 336 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 MATN4O95460 622 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 ZNF135P52742 658 aaPredicted RBP8.15□□□□□ -1.1
SMC5-203ENST00000475540 SEC24CP53992 1094 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 MPP3Q13368 585 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 HABP2Q14520 560 aaPredicted RBP8.15□□□□□ -1.1
SMC5-203ENST00000475540 PPP2R5AQ15172 486 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 PREPLQ4J6C6 727 aaPredicted RBP8.15□□□□□ -1.1
SMC5-203ENST00000475540 PPP1R3BQ86XI6 285 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 KLHDC4Q8TBB5 520 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 DDX17Q92841 729 aaKnown RBP8.15□□□□□ -1.1
SMC5-203ENST00000475540 TMEM125Q96AQ2 219 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 VKORC1Q9BQB6 163 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 SARS2Q9NP81 518 aaKnown RBP8.15□□□□□ -1.1
SMC5-203ENST00000475540 INTS13Q9NVM9 706 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 EID1Q9Y6B2 187 aa8.15□□□□□ -1.1
SMC5-203ENST00000475540 MAST3O60307 1309 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 E7ENX8 843 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 SUN1O94901 812 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 ESRRBO95718 433 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 LPOP22079 712 aaPredicted RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 ANXA11P50995 505 aaKnown RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 TAP2Q03519 686 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 NFE2Q16621 373 aaPredicted RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 CD300EQ496F6 205 aaPredicted RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 CXorf57Q6NSI4 855 aaKnown RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 TAPT1Q6NXT6 567 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 SLC30A10Q6XR72 485 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 DENND1CQ8IV53 801 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 SLC44A3Q8N4M1 653 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 AGAP2Q99490 1192 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 CNPPD1Q9BV87 410 aa8.14□□□□□ -1.11
SMC5-203ENST00000475540 NOB1Q9ULX3 412 aaKnown RBP8.14□□□□□ -1.11
SMC5-203ENST00000475540 H3BML4 177 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 AHSGP02765 367 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 PROZP22891 400 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 FOXI1Q12951 378 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 PCSK4Q6UW60 755 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 EPM2AIP1Q7L775 607 aaPredicted RBP8.13□□□□□ -1.11
SMC5-203ENST00000475540 USP37Q86T82 979 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 LNX2Q8N448 690 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 GPR150Q8NGU9 434 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 SNX19Q92543 992 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 SLC9A6Q92581 669 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 LRIG1Q96JA1 1093 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 AIFM2Q9BRQ8 373 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 ARMT1Q9H993 441 aa8.13□□□□□ -1.11
SMC5-203ENST00000475540 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.13□□□□□ -1.11
SMC5-203ENST00000475540 G3BP2Q9UN86 482 aaKnown RBP8.13□□□□□ -1.11
SMC5-203ENST00000475540 CTNND1O60716 968 aaKnown RBP8.12□□□□□ -1.11
SMC5-203ENST00000475540 MPLP40238 635 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 FGL2Q14314 439 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 HLXQ14774 488 aaPredicted RBP8.12□□□□□ -1.11
SMC5-203ENST00000475540 CRB2Q5IJ48 1285 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 FAM102BQ5T8I3 360 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 B3GNT9Q6UX72 402 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 Q6ZNX1 250 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 MICALCLQ6ZW33 695 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 POC1BQ8TC44 478 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 ACO2Q99798 780 aaKnown RBP8.12□□□□□ -1.11
SMC5-203ENST00000475540 RSAD1Q9HA92 442 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 CNNM1Q9NRU3 951 aa8.12□□□□□ -1.11
SMC5-203ENST00000475540 PCDHA6Q9UN73 950 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms