RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 RCOR1Q9UKL0 485 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 PCDHA7Q9UN72 937 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 ATP6V1DQ9Y5K8 247 aa12.46□□□□□ -0.42
HLA-DOB-208ENST00000475235 NCOR1O75376 2440 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 ANKRD62A6NC57 917 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 SMAPO00193 183 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 CCP110O43303 1012 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 GARTP22102 1010 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 MAGEA8P43361 318 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 MRPL58Q14197 206 aaKnown RBP12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 RESP18Q5W5W9 173 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 NT5DC4Q86YG4 428 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZNF461Q8TAF7 563 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 SLC7A14Q8TBB6 771 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 MFSD14AQ96MC6 490 aa12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
HLA-DOB-208ENST00000475235 C5orf42Q9H799 3197 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 TMEM221A6NGB7 291 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 TISP43B9A030 160 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 M0QZQ0 153 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 M0R296 226 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 KIAA0391O15091 583 aaKnown RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 POLR2DO15514 142 aaKnown RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 TBC1D4O60343 1298 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 IL18RAPO95256 599 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 NFICP08651 508 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 ADSSP30520 456 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 GBP2P32456 591 aaPredicted RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 ELF1P32519 619 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 AARSP49588 968 aaKnown RBP eCLIP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 CASP5P51878 434 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 ASIC1P78348 528 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 KRT85P78386 507 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 ROR1Q01973 937 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 YWHAHQ04917 246 aaPredicted RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 KCNA1Q09470 495 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 BECN1Q14457 450 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 CTXN3Q4LDR2 81 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 TPGS2Q68CL5 300 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 RSPO2Q6UXX9 243 aaPredicted RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 DSTYKQ6XUX3 929 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 USP37Q86T82 979 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 FEZF2Q8TBJ5 459 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 C7orf25Q9BPX7 421 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 LIMD1Q9UGP4 676 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 FBXL5Q9UKA1 691 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 MAFFQ9ULX9 164 aa12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 ZFP37Q9Y6Q3 630 aaPredicted RBP12.44□□□□□ -0.42
HLA-DOB-208ENST00000475235 EIF3DO15371 548 aaKnown RBP eCLIP12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 ABLIM3O94929 683 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 ATF2P15336 505 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 HFE2Q6ZVN8 426 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 FAM213AQ9BRX8 229 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 EPS15L1Q9UBC2 864 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 SUN2Q9UH99 717 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 KCNH3Q9ULD8 1083 aa12.43□□□□□ -0.42
HLA-DOB-208ENST00000475235 WDR27A2RRH5 827 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 PIRO00625 290 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 PRPF6O94906 941 aaKnown RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 OAZ2O95190 189 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ODC1P11926 461 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 TYMPP19971 482 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 FSHRP23945 695 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 MRE11P49959 708 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ARPP19P56211 112 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 LILRA4P59901 499 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 FAM26FQ5R3K3 315 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 C9orf57Q5W0N0 161 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ARMCX5Q6P1M9 558 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CRELD2Q6UXH1 353 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 UNC13DQ70J99 1090 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 BRSK2Q8IWQ3 736 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 KCNV2Q8TDN2 545 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 PBXIP1Q96AQ6 731 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 IKZF4Q9H2S9 585 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 RBAKQ9NYW8 714 aaPredicted RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 POLIQ9UNA4 740 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 PVALEFA0A1B0GWK0 134 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ANO9A1A5B4 782 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 OR6C75A6NL08 312 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 PRRG1O14668 218 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CCL16O15467 120 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 EXTL3O43909 919 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 SH3BP5O60239 455 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 N4BP1O75113 896 aaKnown RBP12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 LRG1P02750 347 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 ASGR2P07307 311 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CPB1P15086 417 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CMA1P23946 247 aa12.42□□□□□ -0.42
HLA-DOB-208ENST00000475235 CASQ1P31415 396 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms