RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 NOTOA8MTQ0 251 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ANKRD65E5RJM6 399 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 GOLGA8RI6L899 631 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RIMBP2O15034 1052 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 MEFVO15553 781 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 GUCY1B2O75343 617 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CBR3O75828 277 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 DKK1O94907 266 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PGM3O95394 542 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CLPTM1O96005 669 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FGF4P08620 206 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CYP2C9P11712 490 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RAG1P15918 1043 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 LPOP22079 712 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 TXLNAP40222 546 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 HUNKP57058 714 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 GALNT1Q10472 559 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 DPYDQ12882 1025 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SEPT6Q14141 434 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 HABP2Q14520 560 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 FAM209BQ5JX69 171 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 KANK2Q63ZY3 851 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TMEM214Q6NUQ4 689 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 DUS1LQ6P1R4 473 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 PGM2L1Q6PCE3 622 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ZNF574Q6ZN55 896 aaPredicted RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 DENND5BQ6ZUT9 1274 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TMPRSS9Q7Z410 1059 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 ZNF554Q86TJ5 538 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FAM160B2Q86V87 743 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CCDC25Q86WR0 208 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CREG2Q8IUH2 290 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PRR18Q8N4B5 295 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 USHBP1Q8N6Y0 703 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TTLL6Q8N841 843 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 PPFIBP2Q8ND30 876 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 C3orf58Q8NDZ4 430 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 FLAD1Q8NFF5 587 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 DPF2Q92785 391 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CDC6Q99741 560 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 XKR8Q9H6D3 395 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CDHR5Q9HBB8 845 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 RHBDL2Q9NX52 303 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 HACD3Q9P035 362 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SAP30BPQ9UHR5 308 aaKnown RBP3.7□□□□□ -1.82
UBR3-208ENST00000474426 SOX13Q9UN79 622 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 SLC8A2Q9UPR5 921 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 TNFSF13BQ9Y275 285 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CBY1Q9Y3M2 126 aa3.7□□□□□ -1.82
UBR3-208ENST00000474426 CTAGE15A4D2H0 777 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 USP17L5A8MUK1 530 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CLDN3O15551 220 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IDH3BO43837 385 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CIDEAO60543 219 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DGAT1O75907 488 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FKBP9O95302 570 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 LCA5LO95447 670 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CTAGE8P0CG41 777 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZBTB48P10074 688 aaPredicted RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 ANPEPP15144 967 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 IL11P20809 199 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 MAPK4P31152 587 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 HOXD13P35453 343 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 MFAP3P55082 362 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 UBE2IP63279 158 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 MBTPS1Q14703 1052 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CASP8Q14790 479 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 EPHA7Q15375 998 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 SWI5Q1ZZU3 235 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PLA2G4EQ3MJ16 856 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PERM1Q5SV97 790 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZBTB41Q5SVQ8 909 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 MEI1Q5TIA1 1274 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 VWA5B1Q5TIE3 1220 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FBXO38Q6PIJ6 1188 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PAPD4Q6PIY7 484 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 LMBR1LQ6UX01 489 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 BRAPQ7Z569 592 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CTAGE6Q86UF2 777 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 UNC5CLQ8IV45 518 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 CTAGE4Q8IX94 777 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZNF527Q8NB42 609 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 XXYLT1Q8NBI6 393 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 ZNF680Q8NEM1 530 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 OR7G1Q8NGA0 311 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DQX1Q8TE96 717 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 ATL1Q8WXF7 558 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 INPP5DQ92835 1189 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 BRF1Q92994 677 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 L3MBTL2Q969R5 705 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 C19orf60Q96EN9 201 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 USB1Q9BQ65 265 aaKnown RBP3.69□□□□□ -1.82
UBR3-208ENST00000474426 KRT23Q9C075 422 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 FAM107BQ9H098 131 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 WNT8AQ9H1J5 351 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 AGPAT3Q9NRZ7 376 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PAG1Q9NWQ8 432 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 VPS28Q9UK41 221 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 DNAJC16Q9Y2G8 782 aa3.69□□□□□ -1.82
UBR3-208ENST00000474426 PTPN22Q9Y2R2 807 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms