RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 HSFX1Q9UBD0 423 aa22.03■■□□□ 1.12
PDLIM4-206ENST00000474421 PTPRZ1P23471 2315 aaPredicted RBP22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 FRMD3A2A2Y4 597 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 LDHAP00338 332 aaKnown RBP22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 CYP11A1P05108 521 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 OR4Q2P0C623 313 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 MYL4P12829 197 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 ADSSP30520 456 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 CCR2P41597 374 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 TAF6P49848 677 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 DUSP4Q13115 394 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 TANGO2Q6ICL3 276 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 FRMD5Q7Z6J6 570 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 SYCP3Q8IZU3 236 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 SMARCD2Q92925 531 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 ZNF396Q96N95 335 aaPredicted RBP22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 ASB16Q96NS5 453 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 PANK2Q9BZ23 570 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 FOXQ1Q9C009 403 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 LRRC27Q9C0I9 530 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 TBC1D7Q9P0N9 293 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 DLGAP2Q9P1A6 1054 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 ASB3Q9Y575 518 aa22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 RIF1Q5UIP0 2472 aaKnown RBP22.02■■□□□ 1.12
PDLIM4-206ENST00000474421 TCHHQ07283 1943 aa22.02■■□□□ 1.11
PDLIM4-206ENST00000474421 SPTLC1O15269 473 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 GARTP22102 1010 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 FAM78AQ5JUQ0 283 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 CENPPQ6IPU0 288 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 CRELD2Q6UXH1 353 aaPredicted RBP22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 CCDC65Q8IXS2 484 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 HS6ST3Q8IZP7 471 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 THEM5Q8N1Q8 247 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 LINC00301Q8NCQ3 95 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 DNASE1L2Q92874 299 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 SNX21Q969T3 373 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 ZNF560Q96MR9 790 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 NELL2Q99435 816 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 BCO2Q9BYV7 579 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 PANK4Q9NVE7 773 aa22.01■■□□□ 1.11
PDLIM4-206ENST00000474421 MTMR11A4FU01 709 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 PRR23AA6NEV1 266 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 CYB561D2O14569 222 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 SPTLC2O15270 562 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 PPP6R2O75170 966 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 VNN2O95498 520 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 FGF19O95750 216 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 FCARP24071 287 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 MAGEA9P43362 315 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 KCNA1Q09470 495 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 SMARCB1Q12824 385 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 SV2CQ496J9 727 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 STXBP4Q6ZWJ1 553 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 ITIH5Q86UX2 942 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 C1orf210Q8IVY1 113 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 FAM213AQ9BRX8 229 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 TRMT61BQ9BVS5 477 aaKnown RBP22■■□□□ 1.11
PDLIM4-206ENST00000474421 PLA2G2FQ9BZM2 168 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 TNMDQ9H2S6 317 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 SEMA4AQ9H3S1 761 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 CUEDC2Q9H467 287 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 TMEM206Q9H813 350 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 MRPS17Q9Y2R5 130 aaKnown RBP22■■□□□ 1.11
PDLIM4-206ENST00000474421 TSC2P49815 1807 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 FAM186AA6NE01 2351 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 DMDP11532 3685 aa22■■□□□ 1.11
PDLIM4-206ENST00000474421 PNPLA4P41247 253 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 TUFMP49411 452 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 UBXN2BQ14CS0 331 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 POTEHQ6S545 545 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 ASCL5Q7RTU5 278 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 PDILTQ8N807 584 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 ATAD1Q8NBU5 361 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 C2orf15Q8WU43 125 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 CACTINQ8WUQ7 758 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 DEPDC1BQ8WUY9 529 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 IRF7Q92985 503 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 E2F7Q96AV8 911 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 PYM1Q9BRP8 204 aaKnown RBP21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 IKZF4Q9H2S9 585 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 SLITRK6Q9H5Y7 841 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 BRD9Q9H8M2 597 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 TRPV4Q9HBA0 871 aa21.99■■□□□ 1.11
PDLIM4-206ENST00000474421 CACNA1IQ9P0X4 2223 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 A0A087X0B3 334 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 FAM170BA6NMN3 283 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 NCAM2O15394 837 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 MOSPD3O75425 235 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 YEATS4O95619 227 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 PSMC3P17980 439 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 AMPD3Q01432 767 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 TEAD2Q15562 447 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 ZC3H14Q6PJT7 736 aaKnown RBP21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 ZNF852Q6ZMS4 543 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 TPRG1Q6ZUI0 275 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 BRSK2Q8IWQ3 736 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 EFCAB13Q8IY85 973 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 ZSCAN18Q8TBC5 510 aaPredicted RBP21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 ZSWIM3Q96MP5 696 aa21.98■■□□□ 1.11
PDLIM4-206ENST00000474421 ZCWPW1Q9H0M4 648 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms