RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TMEM120AQ9BXJ8 343 aa19.65■□□□□ 0.74
ECHDC1-214ENST00000474289 PCIF1Q9H4Z3 704 aa19.65■□□□□ 0.74
ECHDC1-214ENST00000474289 CD209Q9NNX6 404 aa19.65■□□□□ 0.74
ECHDC1-214ENST00000474289 RNASEH1O60930 286 aaKnown RBP19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 ADRA2BP18089 450 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 SCNN1BP51168 640 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 RAP1GDS1P52306 607 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 C1orf220Q5T0J3 134 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 STXBP4Q6ZWJ1 553 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 MARK2Q7KZI7 788 aaKnown RBP19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 PTF1AQ7RTS3 328 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 LCA5Q86VQ0 697 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 LRRC6Q86X45 466 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 TPH2Q8IWU9 490 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 FNBP1Q96RU3 617 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 MANSC1Q9H8J5 431 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 ARHGEF4Q9NR80 690 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 GALNT8Q9NY28 637 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 SEL1LQ9UBV2 794 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 TMCO1Q9UM00 188 aa19.64■□□□□ 0.74
ECHDC1-214ENST00000474289 C2orf71A6NGG8 1288 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 TISP43B9A030 160 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 IMPDH2P12268 514 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 BMP3P12645 472 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 SLC1A1P43005 524 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 GABPAQ06546 454 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 SYDE2Q5VT97 1194 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 TCP10LQ8TDR4 215 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 HSD17B14Q9BPX1 270 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 TSSK1BQ9BXA7 367 aa19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 ALG13Q9NP73 1137 aaKnown RBP19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 SSU72Q9NP77 194 aaKnown RBP19.64■□□□□ 0.73
ECHDC1-214ENST00000474289 F8W8V4 182 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 P4HA2O15460 535 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SLURP2P0DP57 97 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 CRABP2P29373 138 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 CPA2P48052 419 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 GPSM2P81274 684 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 CDC16Q13042 620 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SEPT7Q16181 437 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 MFSD14BQ5SR56 506 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 ARHGAP24Q8N264 748 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SHC3Q92529 594 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 IWS1Q96ST2 819 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 FHDC1Q9C0D6 1143 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 ARMCX1Q9P291 453 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SLC24A2Q9UI40 661 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 DNALI1O14645 258 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 GRAPQ13588 217 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 CCDC142Q17RM4 750 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 ACAD10Q6JQN1 1059 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 NCAPG2Q86XI2 1143 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 ZBED8Q8IZ13 594 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 GRAPLQ8TC17 118 aaPredicted RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 OLFM3Q96PB7 478 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 PHACTR1Q9C0D0 580 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 DNAAF2Q9NVR5 837 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 IL1RAPL1Q9NZN1 696 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 SLC17A7Q9P2U7 560 aa19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 MTO1Q9Y2Z2 717 aaKnown RBP19.63■□□□□ 0.73
ECHDC1-214ENST00000474289 ZSCAN9O15535 394 aaPredicted RBP19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 SLITRK3O94933 977 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 DLDP09622 509 aaKnown RBP19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 ZSCAN5DPP0CG00 497 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 CCNFP41002 786 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 INHBCP55103 352 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 RASA2Q15283 850 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 PHLDB2Q86SQ0 1253 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 STKLD1Q8NE28 680 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 NDE1Q9NXR1 346 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 COL24A1Q17RW2 1714 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 GNPATO15228 680 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 GRIN3BO60391 1043 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 DPY19L2Q6NUT2 758 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 FBXO27Q8NI29 283 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 PLEKHO2Q8TD55 490 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 VPS11Q9H270 941 aa19.62■□□□□ 0.73
ECHDC1-214ENST00000474289 H3BRJ5 948 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 GOLGA8RI6L899 631 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 FCHO1O14526 889 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 MAGEC1O60732 1142 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 PIAS1O75925 651 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 UFL1O94874 794 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 PABPC4LP0CB38 370 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 SREBF1P36956 1147 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 MXI1P50539 228 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 EFTUD2Q15029 972 aaKnown RBP eCLIP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 CFAP157Q5JU67 520 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 RIPOR1Q6ZS17 1223 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 RBM12BQ8IXT5 1001 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 ST13P4Q8IZP2 240 aaPredicted RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 ZSWIM2Q8NEG5 633 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 DDX1Q92499 740 aaKnown RBP19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 PANX3Q96QZ0 392 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 TTC1Q99614 292 aa19.61■□□□□ 0.73
ECHDC1-214ENST00000474289 NMUR2Q9GZQ4 415 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms