RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 DDX23Q9BUQ8 820 aaKnown RBP17.09■□□□□ 0.33
CDPF1-205ENST00000474256 FGFBP2Q9BYJ0 223 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 PLA2G2FQ9BZM2 168 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 TNMDQ9H2S6 317 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 PANK4Q9NVE7 773 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 SIT1Q9Y3P8 196 aa17.09■□□□□ 0.33
CDPF1-205ENST00000474256 MTMR11A4FU01 709 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 YEATS4O95619 227 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 GARTP22102 1010 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 FCARP24071 287 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 WNT7BP56706 349 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 PRKCQQ04759 706 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.32
CDPF1-205ENST00000474256 ANGPT1Q15389 498 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
CDPF1-205ENST00000474256 FAM78AQ5JUQ0 283 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 TANGO2Q6ICL3 276 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 BRSK2Q8IWQ3 736 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 ZSWIM2Q8NEG5 633 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 OR10T2Q8NGX3 314 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 ELSPBP1Q96BH3 223 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 BORCS6Q96GS4 357 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 TMEM209Q96SK2 561 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 FAM213AQ9BRX8 229 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 LRRC3Q9BY71 257 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 ASAH2Q9NR71 780 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 KBTBD4Q9NVX7 518 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 HSFX1Q9UBD0 423 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 DSEQ9UL01 958 aa17.08■□□□□ 0.32
CDPF1-205ENST00000474256 MYO15AQ9UKN7 3530 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 CYB561D2O14569 222 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 CUTAO60888 179 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 LDHAP00338 332 aaKnown RBP17.07■□□□□ 0.32
CDPF1-205ENST00000474256 TAF6P49848 677 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 PLD1Q13393 1074 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 ATAD1Q8NBU5 361 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 PJA1Q8NG27 643 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 SAAL1Q96ER3 474 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 ZSWIM3Q96MP5 696 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 ASB16Q96NS5 453 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 LRRC27Q9C0I9 530 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 CUEDC2Q9H467 287 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 TMEM206Q9H813 350 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 ZFP14Q9HCL3 533 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 SLC27A5Q9Y2P5 690 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 DMDP11532 3685 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
CDPF1-205ENST00000474256 KANSL1LA0AUZ9 987 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 GFRA3O60609 400 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 PRPF6O94906 941 aaKnown RBP17.06■□□□□ 0.32
CDPF1-205ENST00000474256 DCNP07585 359 aaKnown RBP17.06■□□□□ 0.32
CDPF1-205ENST00000474256 MYL4P12829 197 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 EPHB3P54753 998 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 SHC4Q6S5L8 630 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 TMC8Q8IU68 726 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 SYCP3Q8IZU3 236 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 PYM1Q9BRP8 204 aaKnown RBP17.06■□□□□ 0.32
CDPF1-205ENST00000474256 CBWD1Q9BRT8 395 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 ZCWPW1Q9H0M4 648 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 TRPV4Q9HBA0 871 aa17.06■□□□□ 0.32
CDPF1-205ENST00000474256 KPNA7A9QM74 516 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 EXTL3O43909 919 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 ZSCAN22P10073 491 aaPredicted RBP17.05■□□□□ 0.32
CDPF1-205ENST00000474256 GLULP15104 373 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 GJA1P17302 382 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 ALDH1A3P47895 512 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 TEAD2Q15562 447 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 SV2CQ496J9 727 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 WSCD1Q658N2 575 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 CNNM4Q6P4Q7 775 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 METTL23Q86XA0 190 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 TTC9BQ8N6N2 239 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 CXorf38Q8TB03 319 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 SHKBP1Q8TBC3 707 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 SMARCD2Q92925 531 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 PSMG2Q969U7 264 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 OSBPL6Q9BZF3 934 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 GPR88Q9GZN0 384 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 RBAKQ9NYW8 714 aaPredicted RBP17.05■□□□□ 0.32
CDPF1-205ENST00000474256 ASB3Q9Y575 518 aa17.05■□□□□ 0.32
CDPF1-205ENST00000474256 GOLGA8IPA6NC78 632 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 GOLGA8JA6NMD2 632 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 F13A1P00488 732 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 PNPLA4P41247 253 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 TFAMQ00059 246 aaKnown RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 AMPD3Q01432 767 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 FOXD4L5Q5VV16 416 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 STXBP4Q6ZWJ1 553 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 FRMD5Q7Z6J6 570 aa17.04■□□□□ 0.32
CDPF1-205ENST00000474256 DNAJB7Q7Z6W7 309 aaPredicted RBP17.04■□□□□ 0.32
CDPF1-205ENST00000474256 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms