RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ARID3AQ99856 593 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 COLEC11Q9BWP8 271 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 NT5C1AQ9BXI3 368 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 BCO2Q9BYV7 579 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 TSGA10Q9BZW7 698 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 XYLT2Q9H1B5 865 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 SMYD3Q9H7B4 428 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 APOBEC3GQ9HC16 384 aaKnown RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 TBC1D13Q9NVG8 400 aa10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 AJAP1Q9UKB5 411 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 EPN1Q9Y6I3 576 aaPredicted RBP10.97□□□□□ -0.65
PRPF38A-202ENST00000474048 A8MXQ7 604 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 EIF3CLB5ME19 914 aaKnown RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 INPPL1O15357 1258 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TADA2AO75478 443 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 PAEPP09466 180 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ACRP10323 421 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 FECHP22830 423 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ALDH7A1P49419 539 aaKnown RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 SLC8A3P57103 927 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 LILRA4P59901 499 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 SOX4Q06945 474 aaPredicted RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ELAVL2Q12926 359 aaKnown RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ZNF394Q53GI3 561 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 CLLU1OSQ5K130 101 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 C10orf76Q5T2E6 689 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TAF3Q5VWG9 929 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 FAM117BQ6P1L5 589 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TRIM72Q6ZMU5 477 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 OTOP2Q7RTS6 562 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 UBE2Q1Q7Z7E8 422 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TNS4Q8IZW8 715 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 THEM5Q8N1Q8 247 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TMEM86AQ8N2M4 240 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TOP6BLQ8N6T0 577 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 EIF3CQ99613 913 aaKnown RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 CHP1Q99653 195 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 AGPAT1Q99943 283 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 TMEM175Q9BSA9 504 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 AAASQ9NRG9 546 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 GDAP2Q9NXN4 497 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ARHGAP20Q9P2F6 1191 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 HESX1Q9UBX0 185 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 BARX2Q9UMQ3 279 aaPredicted RBP10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 FAN1Q9Y2M0 1017 aa10.96□□□□□ -0.65
PRPF38A-202ENST00000474048 ALPK3Q96L96 1907 aa10.96□□□□□ -0.66
PRPF38A-202ENST00000474048 LTBP2Q14767 1821 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 ESPNB1AK53 854 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 PPEF2O14830 753 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 KRT86O43790 486 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 ALDH2P05091 517 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 CYP11B1P15538 503 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SYN1P17600 705 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 PCSK1P29120 753 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 LHX1P48742 406 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 NDST1P52848 882 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 NAP1L1P55209 391 aaKnown RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 WDR5P61964 334 aaKnown RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 KIF5AQ12840 1032 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 BTG3Q14201 252 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 GPNMBQ14956 572 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 STILQ15468 1287 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC18A3Q16572 532 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 UPP1Q16831 310 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 DNTTIP2Q5QJE6 756 aaKnown RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 CCDC122Q5T0U0 273 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 WDR59Q6PJI9 974 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 IRF2BP2Q7Z5L9 587 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SLC47A2Q86VL8 602 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 UNC93AQ86WB7 457 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 HASPINQ8TF76 798 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 TMEM176AQ96HP8 235 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SENP8Q96LD8 212 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 HEXIM2Q96MH2 286 aaKnown RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 NOX5Q96PH1 765 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 DESI2Q9BSY9 194 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 CXCL16Q9H2A7 254 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 MIOSQ9NXC5 875 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 KIAA1257Q9ULG3 409 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 ZMYND8Q9ULU4 1186 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 PYCARDQ9ULZ3 195 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 PRG3Q9Y2Y8 225 aaPredicted RBP10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 TTC3P53804 2025 aa10.95□□□□□ -0.66
PRPF38A-202ENST00000474048 TET1Q8NFU7 2136 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SCN1AP35498 2009 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 ATP8B3O60423 1300 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 SF3B1O75533 1304 aaKnown RBP eCLIP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CILPO75339 1184 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 TACC1O75410 805 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 CAPN15O75808 1086 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 PLEKP08567 350 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 FAM163BP0C2L3 166 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 VDRP11473 427 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 LAG3P18627 525 aa10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 GNL1P36915 607 aaPredicted RBP10.94□□□□□ -0.66
PRPF38A-202ENST00000474048 MAGEA1P43355 309 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms