RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 T-ENOLP0DO92 83 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 GSPT1P15170 499 aaKnown RBP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 SDSP20132 328 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 POU3F2P20265 443 aaPredicted RBP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 NEK4P51957 841 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 FSCN1Q16658 493 aaKnown RBP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 CD300EQ496F6 205 aaPredicted RBP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 MUM1L1Q5H9M0 696 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 DACT2Q5SW24 774 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 MIS18BP1Q6P0N0 1132 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 ANKRD16Q6P6B7 361 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 C9orf47Q6ZRZ4 202 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 RASSF3Q86WH2 238 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 NRACQ8N912 160 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 C16orf52Q8NHV5 167 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 RFKQ969G6 155 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 REPS1Q96D71 796 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 HIPK2Q9H2X6 1198 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 PRDM12Q9H4Q4 367 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.9□□□□□ -1.95
CCDC39-203ENST00000473854 CDYLQ9Y232 598 aa2.9□□□□□ -1.95
CCDC39-203ENST00000473854 LCHNA4D1U4 455 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 CD8B2A6NJW9 211 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 KIAA0391O15091 583 aaKnown RBP2.89□□□□□ -1.95
CCDC39-203ENST00000473854 KPNA6O60684 536 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 BCAR3O75815 825 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 MTHFD2P13995 350 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.89□□□□□ -1.95
CCDC39-203ENST00000473854 ANO4Q32M45 955 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 DGKKQ5KSL6 1271 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 SOGA3Q5TF21 947 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 SHC4Q6S5L8 630 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 RBMXL3Q8N7X1 1067 aaKnown RBP2.89□□□□□ -1.95
CCDC39-203ENST00000473854 ATRIPQ8WXE1 791 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 STON2Q8WXE9 905 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 CUL5Q93034 780 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 FKBP10Q96AY3 582 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 GPR101Q96P66 508 aaPredicted RBP2.89□□□□□ -1.95
CCDC39-203ENST00000473854 ASB2Q96Q27 587 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 FEZ1Q99689 392 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 FAM118BQ9BPY3 351 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 ARHGEF3Q9NR81 526 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 CTTNBP2NLQ9P2B4 639 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 DPP7Q9UHL4 492 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 ACTL7AQ9Y615 435 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 SPATA31A3Q5VYP0 1347 aa2.89□□□□□ -1.95
CCDC39-203ENST00000473854 A0A0B4J269 797 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 FAM171A2A8MVW0 826 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 VWC2LB2RUY7 222 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 WNT10BO00744 389 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 TRIAP1O43715 76 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 SUN1O94901 812 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 NPTX2P47972 431 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 NANOS2P60321 138 aaKnown RBP2.88□□□□□ -1.95
CCDC39-203ENST00000473854 IL2P60568 153 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 MRPS9P82933 396 aaKnown RBP2.88□□□□□ -1.95
CCDC39-203ENST00000473854 TUBB3Q13509 450 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 FHL3Q13643 280 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 ADRM1Q16186 407 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 Q4G0T1 1027 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 CT83Q5H943 113 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 WDR53Q7Z5U6 358 aaPredicted RBP2.88□□□□□ -1.95
CCDC39-203ENST00000473854 C8orf58Q8NAV2 365 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 OR2W6PQ8NHA6 318 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 AUTS2Q8WXX7 1259 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 HOXB13Q92826 284 aaPredicted RBP2.88□□□□□ -1.95
CCDC39-203ENST00000473854 COQ8BQ96D53 544 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 MYOCQ99972 504 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 TRMOQ9BU70 441 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 MS4A5Q9H3V2 200 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 MANSC1Q9H8J5 431 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 CCDC9Q9Y3X0 531 aaKnown RBP2.88□□□□□ -1.95
CCDC39-203ENST00000473854 WDR17Q8IZU2 1322 aa2.88□□□□□ -1.95
CCDC39-203ENST00000473854 TCRBV7S2A1N4TA0A589 114 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 PRSS47A8MTI9 375 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 FPR1P21462 350 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 ENPP1P22413 925 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 KCNJ5P48544 419 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 ALDH9A1P49189 494 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 HTR6P50406 440 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 POU6F2P78424 691 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-203ENST00000473854 CDK17Q00537 523 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 MTM1Q13496 603 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 CERKLQ49MI3 558 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-203ENST00000473854 BROXQ5VW32 411 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 AHI1Q8N157 1196 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 PPM1KQ8N3J5 372 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 PNLDC1Q8NA58 520 aaKnown RBP2.87□□□□□ -1.95
CCDC39-203ENST00000473854 SSH1Q8WYL5 1049 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 SLC5A5Q92911 643 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 EAF2Q96CJ1 260 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-203ENST00000473854 C5orf34Q96MH7 638 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 OSBPL9Q96SU4 736 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 ADI1Q9BV57 179 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 TPSD1Q9BZJ3 242 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 TANGO6Q9C0B7 1094 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 C11orf54Q9H0W9 315 aaPredicted RBP2.87□□□□□ -1.95
CCDC39-203ENST00000473854 LDAHQ9H6V9 325 aa2.87□□□□□ -1.95
CCDC39-203ENST00000473854 SPTLC3Q9NUV7 552 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms