RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 CFAP54Q96N23 3096 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 ZFHX2Q9C0A1 2572 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 HELZP42694 1942 aaKnown RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 A0A1W2PRU2 124 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 OR6C75A6NL08 312 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SPTLC1O15269 473 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 OAZ2O95190 189 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 GCNT3O95395 438 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 VNN2O95498 520 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SP9P0CG40 484 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 FCARP24071 287 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 GDI1P31150 447 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 VIPR2P41587 438 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 STAT6P42226 847 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 EPHB3P54753 998 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 KCNA1Q09470 495 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SLC39A12Q504Y0 691 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 FOXD4L5Q5VV16 416 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SLFN12LQ6IEE8 588 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 ZNF720Q7Z2F6 126 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 CD302Q8IX05 232 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 PDILTQ8N807 584 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 ATAD1Q8NBU5 361 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 FAM200AQ8TCP9 573 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 FOXD4L4Q8WXT5 416 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SAAL1Q96ER3 474 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 ASB16Q96NS5 453 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 SEPT5Q99719 369 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 PYM1Q9BRP8 204 aaKnown RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 TRMT61BQ9BVS5 477 aaKnown RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 LTB4R2Q9NPC1 389 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 AVENQ9NQS1 362 aaPredicted RBP12.94□□□□□ -0.34
SMPD4-217ENST00000473720 DPP3Q9NY33 737 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 PTPRDP23468 1912 aa12.94□□□□□ -0.34
SMPD4-217ENST00000473720 MTMR11A4FU01 709 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 CYB561D2O14569 222 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 LAMTOR5O43504 91 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 MOSPD3O75425 235 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 TYMPP19971 482 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 SCP2P22307 547 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 TARSP26639 723 aaKnown RBP12.93□□□□□ -0.34
SMPD4-217ENST00000473720 ABCD1P33897 745 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 AARSP49588 968 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMPD4-217ENST00000473720 GPR17Q13304 367 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 MGAT5BQ3V5L5 792 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 VITQ6UXI7 678 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 METTL23Q86XA0 190 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 SYCP3Q8IZU3 236 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 ZSWIM2Q8NEG5 633 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 ZSCAN18Q8TBC5 510 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-217ENST00000473720 USP28Q96RU2 1077 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 FAM213AQ9BRX8 229 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 DNAJC25Q9H1X3 360 aa12.93□□□□□ -0.34
SMPD4-217ENST00000473720 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.93□□□□□ -0.34
SMPD4-217ENST00000473720 A0A087X0B3 334 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 GOLGA8IPA6NC78 632 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 GOLGA8JA6NMD2 632 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 PIRO00625 290 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 LMNAP02545 664 aaKnown RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ADRB2P07550 413 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 PSMC3P17980 439 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 TAF6P49848 677 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 CASP5P51878 434 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 CSTF1Q05048 431 aaKnown RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 PLD1Q13393 1074 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 MYBPC2Q14324 1141 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 STK38Q15208 465 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 STXBP5Q5T5C0 1151 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 CENPPQ6IPU0 288 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ZC3H14Q6PJT7 736 aaKnown RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ZNF852Q6ZMS4 543 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 CCDC73Q6ZRK6 1079 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 EFCAB13Q8IY85 973 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 OR10T2Q8NGX3 314 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 SHKBP1Q8TBC3 707 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 SMARCD2Q92925 531 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 KCNN1Q92952 543 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 HVCN1Q96D96 273 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 DNAJC19Q96DA6 116 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ACCSQ96QU6 501 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 TSPAN18Q96SJ8 248 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 LPIN3Q9BQK8 851 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 DDX23Q9BUQ8 820 aaKnown RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ST6GALNAC4Q9H4F1 302 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ASB7Q9H672 318 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
SMPD4-217ENST00000473720 SEL1LQ9UBV2 794 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 MAFFQ9ULX9 164 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 EXOC7Q9UPT5 735 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 MTMR6Q9Y217 621 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 DERAQ9Y315 318 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 MYO16Q9Y6X6 1858 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 F5P12259 2224 aa12.92□□□□□ -0.34
SMPD4-217ENST00000473720 RIF1Q5UIP0 2472 aaKnown RBP12.91□□□□□ -0.34
SMPD4-217ENST00000473720 NCANO14594 1321 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms