RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CCDC94Q9BW85 323 aaPredicted RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 ELOVL4Q9GZR5 314 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 DDX47Q9H0S4 455 aaKnown RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 ARGLU1Q9NWB6 273 aaPredicted RBP6.64□□□□□ -1.35
CLK1-210ENST00000473565 ADAM22Q9P0K1 906 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 PARP2Q9UGN5 583 aa6.64□□□□□ -1.35
CLK1-210ENST00000473565 GRIN2DO15399 1336 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SEPT4O43236 478 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SPOPO43791 374 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ADAMTS4O75173 837 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ZRANB2O95218 330 aaKnown RBP eCLIP6.63□□□□□ -1.35
CLK1-210ENST00000473565 FGGP02679 453 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 GJC1P36383 396 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 AFF1P51825 1210 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 BPIFB4P59827 614 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 KCNA10Q16322 511 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 LONRF2Q1L5Z9 754 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 UBXN11Q5T124 520 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 MON1BQ7L1V2 547 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 FAM228AQ86W67 206 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 WDTC1Q8N5D0 677 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SNX27Q96L92 541 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 FAM81BQ96LP2 452 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ZFP42Q96MM3 310 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 KATNAL1Q9BW62 490 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ASB7Q9H672 318 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ST7Q9NRC1 585 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 CYTH4Q9UIA0 394 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RAB21Q9UL25 225 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 USTQ9Y2C2 406 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 Q9Y3F1 56 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 CDY2AQ9Y6F7 541 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 GLI1P08151 1106 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RAD23BP54727 409 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RPL7AP62424 266 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 CBX1P83916 185 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 DCAF4L1Q3SXM0 396 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 TWF2Q6IBS0 349 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 C8orf74Q6P047 294 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ZNF572Q7Z3I7 529 aaPredicted RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 MMGT1Q8N4V1 131 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SLC4A11Q8NBS3 891 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 LPPQ93052 612 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 HHIPL1Q96JK4 782 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RNPC3Q96LT9 517 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 ERVK-5Q9HDB9 667 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ARFGAP3Q9NP61 516 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 CREBZFQ9NS37 354 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 KLHL11Q9NVR0 708 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 GTF2IRD1Q9UHL9 959 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 NME7Q9Y5B8 376 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SNX9Q9Y5X1 595 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 TCRBV7S2A1N4TA0A589 114 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 PGRMC1O00264 195 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 KRIT1O00522 736 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RAD51CO43502 376 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 ALDH1A1P00352 501 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 TCF4P15884 667 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 HOXC8P31273 242 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 PTP4A2Q12974 167 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 IRF5Q13568 498 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 BEND6Q5SZJ8 279 aaPredicted RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 ZNF677Q86XU0 584 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 C12orf29Q8N999 325 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 SMG8Q8ND04 991 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 UBA3Q8TBC4 463 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 RPGRIP1Q96KN7 1286 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 MRPL45Q9BRJ2 306 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 BCO2Q9BYV7 579 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 CELF4Q9BZC1 486 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 AGO3Q9H9G7 860 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 TRMT13Q9NUP7 481 aaKnown RBP6.63□□□□□ -1.35
CLK1-210ENST00000473565 IPPQ9Y573 584 aa6.63□□□□□ -1.35
CLK1-210ENST00000473565 CCDC151A5D8V7 595 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 GOLGA8SH3BPF8 625 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 CHRNA1P02708 482 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 PYGMP11217 842 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 SSR1P43307 286 aaKnown RBP6.62□□□□□ -1.35
CLK1-210ENST00000473565 NDST1P52848 882 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 CRYBB1P53674 252 aaPredicted RBP6.62□□□□□ -1.35
CLK1-210ENST00000473565 YARSP54577 528 aaKnown RBP6.62□□□□□ -1.35
CLK1-210ENST00000473565 MRPS6P82932 125 aaKnown RBP6.62□□□□□ -1.35
CLK1-210ENST00000473565 CCDC142Q17RM4 750 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 ZNF618Q5T7W0 954 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 C11orf63Q6NUN7 778 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 ZDHHC14Q8IZN3 488 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 PBKQ96KB5 322 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.358e-10■■□□□ 13.9
CLK1-210ENST00000473565 SPC25Q9HBM1 224 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 C2CD2Q9Y426 696 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 SMIM28A0A1B0GU29 152 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 SPTLC1O15269 473 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 CILPO75339 1184 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 MTA2O94776 668 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 GNAT1P11488 350 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 CYP3A5P20815 502 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 THPOP40225 353 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 PEX5P50542 639 aa6.62□□□□□ -1.35
CLK1-210ENST00000473565 HADHBP55084 474 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms