RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TULP1O00294 542 aaPredicted RBP14.15□□□□□ -0.14
TPM3-216ENST00000473036 TGM5O43548 720 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
TPM3-216ENST00000473036 LETM1O95202 739 aaPredicted RBP14.15□□□□□ -0.14
TPM3-216ENST00000473036 VNN2O95498 520 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 C4BPAP04003 597 aaKnown RBP14.15□□□□□ -0.14
TPM3-216ENST00000473036 KLRC2P26717 231 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 ELAVL2Q12926 359 aaKnown RBP14.15□□□□□ -0.14
TPM3-216ENST00000473036 KLHL40Q2TBA0 621 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 CEP135Q66GS9 1140 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 KIAA1841Q6NSI8 718 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 ANKRD54Q6NXT1 300 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 TRAPPC11Q7Z392 1133 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 WDR49Q8IV35 697 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 SENP8Q96LD8 212 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 APOL5Q9BWW9 433 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 AGAP1Q9UPQ3 857 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 NUB1Q9Y5A7 615 aa14.15□□□□□ -0.14
TPM3-216ENST00000473036 SYN3O14994 580 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 KIF20AO95235 890 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 VNN1O95497 513 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 SRGAP2BP0DMP2 458 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 CCNE1P24864 410 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 ADAM9Q13443 819 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 DUOXA2Q1HG44 320 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 EDRF1Q3B7T1 1238 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 TDRD10Q5VZ19 366 aaKnown RBP14.14□□□□□ -0.15
TPM3-216ENST00000473036 TTI2Q6NXR4 508 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 TMEM209Q96SK2 561 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 EMILIN2Q9BXX0 1053 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 GTPBP4Q9BZE4 634 aaKnown RBP14.14□□□□□ -0.15
TPM3-216ENST00000473036 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 SSX2IPQ9Y2D8 614 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 BACE2Q9Y5Z0 518 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 CDY1Q9Y6F8 540 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 NOTCH4Q99466 2003 aa14.14□□□□□ -0.15
TPM3-216ENST00000473036 HCRTO43612 131 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TRAPPC3O43617 180 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 LRRN2O75325 713 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 OAZ2O95190 189 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 WEE2P0C1S8 567 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TMEM191BP0C7N4 346 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TRIM49P0CI25 452 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TRIM49CP0CI26 452 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TNNI1P19237 187 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 OR1D2P34982 312 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TAF6P49848 677 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 PPP3CAQ08209 521 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 TCF15Q12870 199 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 RAB33AQ14088 237 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 SURF1Q15526 300 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 SLC8B1Q6J4K2 584 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 KLHL10Q6JEL2 608 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 C15orf39Q6ZRI6 1047 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 LIMS2Q7Z4I7 341 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 OR10T2Q8NGX3 314 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 CACTINQ8WUQ7 758 aaKnown RBP14.13□□□□□ -0.15
TPM3-216ENST00000473036 SUSD6Q92537 303 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 XYLT2Q9H1B5 865 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.13□□□□□ -0.15
TPM3-216ENST00000473036 FBXL5Q9UKA1 691 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 USP15Q9Y4E8 981 aaPredicted RBP14.13□□□□□ -0.15
TPM3-216ENST00000473036 NME7Q9Y5B8 376 aa14.13□□□□□ -0.15
TPM3-216ENST00000473036 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.13□□□□□ -0.15
TPM3-216ENST00000473036 ZFHX2Q9C0A1 2572 aaPredicted RBP14.13□□□□□ -0.15
TPM3-216ENST00000473036 WDR27A2RRH5 827 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 KPNA7A9QM74 516 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 PROB1E7EW31 1015 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 CYB561D2O14569 222 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 MAPK13O15264 365 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 RFPL2O75678 378 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 CYP11A1P05108 521 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 ADH1AP07327 375 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 KRT19P08727 400 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 OR4Q2P0C623 313 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 STX17P56962 302 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 RBP5P82980 135 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 ROR1Q01973 937 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 BMS1Q14692 1282 aaKnown RBP14.12□□□□□ -0.15
TPM3-216ENST00000473036 IER5LQ5T953 404 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 WSCD1Q658N2 575 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 DSTYKQ6XUX3 929 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 RBM43Q6ZSC3 357 aaKnown RBP14.12□□□□□ -0.15
TPM3-216ENST00000473036 ANKS3Q6ZW76 656 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 OSTM1Q86WC4 334 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 FAM186BQ8IYM0 893 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 LRRC52Q8N7C0 313 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 NELFBQ8WX92 580 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 CASP10Q92851 521 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 DHTKD1Q96HY7 919 aaPredicted RBP14.12□□□□□ -0.15
TPM3-216ENST00000473036 ANKRD36BP1Q96IX9 119 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 FNBP1Q96RU3 617 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 NUP62CLQ9H1M0 184 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 MAN1C1Q9NR34 630 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 FBXW11Q9UKB1 542 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 L1RE1Q9UN81 338 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 CTNND2Q9UQB3 1225 aa14.12□□□□□ -0.15
TPM3-216ENST00000473036 ABLIM3O94929 683 aa14.11□□□□□ -0.15
TPM3-216ENST00000473036 PAPLNO95428 1278 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms