RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 URODP06132 367 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 FGFR3P22607 806 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 TKTP29401 623 aaKnown RBP18.55■□□□□ 0.56
PKD1-208ENST00000472577 CA8P35219 290 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 VAMP7P51809 220 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 PTPN5P54829 565 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 LILRA4P59901 499 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 PTPN21Q16825 1174 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.55■□□□□ 0.56
PKD1-208ENST00000472577 INTS8Q75QN2 995 aaKnown RBP18.55■□□□□ 0.56
PKD1-208ENST00000472577 TRAPPC11Q7Z392 1133 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 CEP57Q86XR8 500 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 CSGALNACT2Q8N6G5 542 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 SUSD3Q96L08 255 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 FAM86C1Q9NVL1 165 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 RWDD2AQ9UIY3 292 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 AGAP1Q9UPQ3 857 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 IRAK3Q9Y616 596 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 SCN1AP35498 2009 aa18.55■□□□□ 0.56
PKD1-208ENST00000472577 SLC16A3O15427 465 aaKnown RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 TRAPPC3O43617 180 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 KRT19P08727 400 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 TRIM49P0CI25 452 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 TRIM49CP0CI26 452 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 EPB41P11171 864 aaKnown RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 MCCD1P59942 119 aaPredicted RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 BFSP1Q12934 665 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 BMS1Q14692 1282 aaKnown RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 KIAA1841Q6NSI8 718 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 PRSS55Q6UWB4 352 aaPredicted RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 RIN2Q8WYP3 895 aaPredicted RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 CEP63Q96MT8 703 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 TTPALQ9BTX7 342 aa18.54■□□□□ 0.56
PKD1-208ENST00000472577 MRPL17Q9NRX2 175 aaKnown RBP18.54■□□□□ 0.56
PKD1-208ENST00000472577 FSD2A1L4K1 749 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 M0QZQ0 153 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 C4BPAP04003 597 aaKnown RBP18.53■□□□□ 0.56
PKD1-208ENST00000472577 KRT13P13646 458 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 TAF6P49848 677 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 RBP5P82980 135 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 ENPEPQ07075 957 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 TDRD10Q5VZ19 366 aaKnown RBP18.53■□□□□ 0.56
PKD1-208ENST00000472577 SASS6Q6UVJ0 657 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 FILIP1Q7Z7B0 1213 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 LNX1Q8TBB1 728 aaPredicted RBP18.53■□□□□ 0.56
PKD1-208ENST00000472577 PIK3R5Q8WYR1 880 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 SYAP1Q96A49 352 aaPredicted RBP18.53■□□□□ 0.56
PKD1-208ENST00000472577 ZNF560Q96MR9 790 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 PCDHB8Q9UN66 801 aa18.53■□□□□ 0.56
PKD1-208ENST00000472577 SYN3O14994 580 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 CLASP2O75122 1294 aaKnown RBP18.52■□□□□ 0.56
PKD1-208ENST00000472577 CST3P01034 146 aaPredicted RBP18.52■□□□□ 0.56
PKD1-208ENST00000472577 CNPP09543 421 aaKnown RBP18.52■□□□□ 0.56
PKD1-208ENST00000472577 AP3M2P53677 418 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 PPP3CAQ08209 521 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 SV2CQ496J9 727 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 DSTYKQ6XUX3 929 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 GPR65Q8IYL9 337 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 LRRC52Q8N7C0 313 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 SENP8Q96LD8 212 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 KLHL5Q96PQ7 755 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 SRRTQ9BXP5 876 aaKnown RBP18.52■□□□□ 0.56
PKD1-208ENST00000472577 RXFP1Q9HBX9 757 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 DACH1Q9UI36 760 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 SSX2IPQ9Y2D8 614 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 TIMM13Q9Y5L4 95 aaPredicted RBP18.52■□□□□ 0.56
PKD1-208ENST00000472577 HCFC2Q9Y5Z7 792 aa18.52■□□□□ 0.56
PKD1-208ENST00000472577 KPNA7A9QM74 516 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 IKBKBO14920 756 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 TEX28O15482 410 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 SRGAP2BP0DMP2 458 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 RPL17P18621 184 aaKnown RBP18.51■□□□□ 0.55
PKD1-208ENST00000472577 PAX3P23760 479 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 PNPLA4P41247 253 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 BIRC3Q13489 604 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 PSMD5Q16401 504 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 ZACNQ401N2 412 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 VARS2Q5ST30 1063 aaKnown RBP18.51■□□□□ 0.55
PKD1-208ENST00000472577 C15orf39Q6ZRI6 1047 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 SV2AQ7L0J3 742 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 USP37Q86T82 979 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 FEZF2Q8TBJ5 459 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 SMOC2Q9H3U7 446 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 POMKQ9H5K3 350 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 TSC2P49815 1807 aa18.51■□□□□ 0.55
PKD1-208ENST00000472577 CACNA1HO95180 2353 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 VNN1O95497 513 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 WEE2P0C1S8 567 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 ERCC5P28715 1186 aaPredicted RBP18.5■□□□□ 0.55
PKD1-208ENST00000472577 AVPR2P30518 371 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 GCLMP48507 274 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 MYL6P60660 151 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 MRPL58Q14197 206 aaKnown RBP18.5■□□□□ 0.55
PKD1-208ENST00000472577 NFKBIBQ15653 356 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 STX1AQ16623 288 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 CCDC40Q4G0X9 1142 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 C11orf57Q6ZUT1 292 aaPredicted RBP18.5■□□□□ 0.55
PKD1-208ENST00000472577 FRMD5Q7Z6J6 570 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 HPDLQ96IR7 371 aa18.5■□□□□ 0.55
PKD1-208ENST00000472577 EMILIN2Q9BXX0 1053 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms