RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PPP1R37O75864 691 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 LRG1P02750 347 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 KRT18P05783 430 aaKnown RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 POU2F2P09086 479 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 SP9P0CG40 484 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ELF1P32519 619 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 SOX9P48436 509 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 GPR15P49685 360 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 UBXN2BQ14CS0 331 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 MLF2Q15773 248 aaPredicted RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 SDHAF4Q5VUM1 108 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 WSCD1Q658N2 575 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 LMBRD2Q68DH5 695 aaPredicted RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 ADALQ6DHV7 355 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 CENPPQ6IPU0 288 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 PHLDB3Q6NSJ2 640 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 PDXDC1Q6P996 788 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 VITQ6UXI7 678 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 DSTYKQ6XUX3 929 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 GAREM2Q75VX8 874 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 BRAPQ7Z569 592 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 PDILTQ8N807 584 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 PJA1Q8NG27 643 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 CXorf38Q8TB03 319 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 KCNN1Q92952 543 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 NXPE3Q969Y0 559 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ZFYVE19Q96K21 471 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 AK8Q96MA6 479 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ASB16Q96NS5 453 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 LPIN3Q9BQK8 851 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 CCSER1Q9C0I3 900 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 SMG9Q9H0W8 520 aaKnown RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 PCIF1Q9H4Z3 704 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 RPF1Q9H9Y2 349 aaKnown RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 PLEKHA5Q9HAU0 1116 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 KCND2Q9NZV8 630 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 KCNH3Q9ULD8 1083 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ODF2LQ9ULJ1 636 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 UBQLN1Q9UMX0 589 aaKnown RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 KIF3AQ9Y496 699 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 YIPF1Q9Y548 306 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.77□□□□□ -1.01
USP48-207ENST00000471752 STYXL1Q9Y6J8 313 aa8.77□□□□□ -1.01
USP48-207ENST00000471752 LAMA1P25391 3075 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 A0A1W2PRU2 124 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 MTMR11A4FU01 709 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 ECI2O75521 394 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 PRPF6O94906 941 aaKnown RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 CPB1P15086 417 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 CYP3A5P20815 502 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 NUBP1P53384 320 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 PPP2R3AQ06190 1150 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 GPR17Q13304 367 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 GAS6Q14393 721 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 SLC39A14Q15043 492 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 TPGS2Q68CL5 300 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 OVOS1Q6IE37 1185 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 ZNF280DQ6N043 979 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 TPRG1Q6ZUI0 275 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 APBB1IPQ7Z5R6 666 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 OSTM1Q86WC4 334 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 C1orf210Q8IVY1 113 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 APPL2Q8NEU8 664 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 RIN3Q8TB24 985 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 GIPC2Q8TF65 315 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 NKD2Q969F2 451 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 ELMO3Q96BJ8 720 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 ZNF512Q96ME7 567 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 CBWD1Q9BRT8 395 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 LTB4R2Q9NPC1 389 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 AVENQ9NQS1 362 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 POLR3BQ9NW08 1133 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 DPP3Q9NY33 737 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 GDE1Q9NZC3 331 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 AGO2Q9UKV8 859 aaKnown RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 PCDHB13Q9Y5F0 798 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 ZFP37Q9Y6Q3 630 aaPredicted RBP8.76□□□□□ -1.01
USP48-207ENST00000471752 PTPRJQ12913 1337 aa8.76□□□□□ -1.01
USP48-207ENST00000471752 ANTXRLA6NF34 631 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 ARNTLO00327 626 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 CYB561D2O14569 222 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 TBCAO75347 108 aaKnown RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 ATF6P18850 670 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 GDI1P31150 447 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 MCM2P49736 904 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 EPHA5P54756 1037 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 CYP4F8P98187 520 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 YWHAHQ04917 246 aaPredicted RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 CSTF1Q05048 431 aaKnown RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 DMWDQ09019 674 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 MTAPQ13126 283 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 PKP1Q13835 747 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 TMEM132DQ14C87 1099 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 SLC39A12Q504Y0 691 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 RRAGBQ5VZM2 374 aa8.75□□□□□ -1.01
USP48-207ENST00000471752 NAIF1Q69YI7 327 aaPredicted RBP8.75□□□□□ -1.01
USP48-207ENST00000471752 TXNDC11Q6PKC3 985 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms