RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 RAB33AQ14088 237 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 SKOR2Q2VWA4 1001 aaPredicted RBP16.25■□□□□ 0.19
SNX13-205ENST00000471744 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 TDRD10Q5VZ19 366 aaKnown RBP16.25■□□□□ 0.19
SNX13-205ENST00000471744 OVOS1Q6IE37 1185 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 SLC8B1Q6J4K2 584 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 SV2AQ7L0J3 742 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 TOP6BLQ8N6T0 577 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 TAF4BQ92750 862 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 EEF2KMTQ96G04 330 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 CLSTN3Q9BQT9 956 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 PLEKHA4Q9H4M7 779 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 VRTNQ9H8Y1 702 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 TMEM8AQ9HCN3 771 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
SNX13-205ENST00000471744 LINC01565O15544 149 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 TBC1D4O60343 1298 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 LETM1O95202 739 aaPredicted RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 GLP2RO95838 553 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 FAM163BP0C2L3 166 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 CCDC192P0DO97 292 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 RPL17P18621 184 aaKnown RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 KCNA5P22460 613 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 OR1D2P34982 312 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 NCOA4Q13772 614 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 STX1AQ16623 288 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 TPD52L1Q16890 204 aaPredicted RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 PUS10Q3MIT2 529 aaKnown RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 TCERG1LQ5VWI1 586 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 KRT39Q6A163 491 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 CAVIN1Q6NZI2 390 aaKnown RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 C15orf39Q6ZRI6 1047 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 RTL10Q7L3V2 364 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 THEM5Q8N1Q8 247 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 ATXN2LQ8WWM7 1075 aaKnown RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 FAM84AQ96KN4 292 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 SRRTQ9BXP5 876 aaKnown RBP16.24■□□□□ 0.19
SNX13-205ENST00000471744 IMPG2Q9BZV3 1241 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 TMEM63CQ9P1W3 806 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 MAFFQ9ULX9 164 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 FAM50BQ9Y247 325 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 SNX9Q9Y5X1 595 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 CDY1Q9Y6F8 540 aa16.24■□□□□ 0.19
SNX13-205ENST00000471744 N4BP1O75113 896 aaKnown RBP16.23■□□□□ 0.19
SNX13-205ENST00000471744 TBX10O75333 385 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 CST3P01034 146 aaPredicted RBP16.23■□□□□ 0.19
SNX13-205ENST00000471744 TRIM49P0CI25 452 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 TRIM49CP0CI26 452 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 P4HA1P13674 534 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 LTBRP36941 435 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 PIK3CAP42336 1068 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 MXI1P50539 228 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 MARSP56192 900 aaKnown RBP16.23■□□□□ 0.19
SNX13-205ENST00000471744 TNNC1P63316 161 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 SGSM1Q2NKQ1 1148 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 LEXMQ3ZCV2 418 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 DCAF17Q5H9S7 520 aaPredicted RBP16.23■□□□□ 0.19
SNX13-205ENST00000471744 TPGS2Q68CL5 300 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 ANKRD54Q6NXT1 300 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 LILRA6Q6PI73 481 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 GLYCTKQ8IVS8 523 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 FAM114A1Q8IWE2 563 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 CCDC150Q8NCX0 1101 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 VN1R2Q8NFZ6 395 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 CD207Q9UJ71 328 aa16.23■□□□□ 0.19
SNX13-205ENST00000471744 TIMM13Q9Y5L4 95 aaPredicted RBP16.23■□□□□ 0.19
SNX13-205ENST00000471744 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 TGM5O43548 720 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 EPCAMP16422 314 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 GCLMP48507 274 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 LHX1P48742 406 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 MYL6P60660 151 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 MRPS5P82675 430 aaKnown RBP16.22■□□□□ 0.19
SNX13-205ENST00000471744 MYL7Q01449 175 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 ROR1Q01973 937 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 PPP3CAQ08209 521 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 SMARCB1Q12824 385 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 ZNF667Q5HYK9 610 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 WSCD1Q658N2 575 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 PDCL2Q8N4E4 241 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 ZNF461Q8TAF7 563 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 MSLNLQ96KJ4 702 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 XYLT2Q9H1B5 865 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 SFXN1Q9H9B4 322 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 MAN1C1Q9NR34 630 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 CLEC1BQ9P126 229 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 FBXW11Q9UKB1 542 aa16.22■□□□□ 0.19
SNX13-205ENST00000471744 BARX2Q9UMQ3 279 aaPredicted RBP16.22■□□□□ 0.19
SNX13-205ENST00000471744 CLSTN1O94985 981 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 VNN1O95497 513 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 HLA-DRAP01903 254 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 CPB1P15086 417 aa16.21■□□□□ 0.19
SNX13-205ENST00000471744 PCSK1P29120 753 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms