RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 MTAPQ13126 283 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 LRRC32Q14392 662 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 GRM2Q14416 872 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 LINC01559Q495D7 138 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 XKR4Q5GH76 650 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 FAM78AQ5JUQ0 283 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 PRSS36Q5K4E3 855 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 TTC38Q5R3I4 469 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 NT5DC1Q5TFE4 455 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 LAIR1Q6GTX8 287 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 TANGO2Q6ICL3 276 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 YAF2Q8IY57 180 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 CELF5Q8N6W0 485 aaKnown RBP9.97□□□□□ -0.81
CPSF4-211ENST00000471455 FAM3CQ92520 227 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 BAP1Q92560 729 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 C8orf76Q96K31 380 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 ASB16Q96NS5 453 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 ACAP3Q96P50 834 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 TIPINQ9BVW5 301 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 CDT1Q9H211 546 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 FOXP1Q9H334 677 aaPredicted RBP9.97□□□□□ -0.81
CPSF4-211ENST00000471455 C17orf75Q9HAS0 396 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 GOLGA2P5Q9HBQ8 144 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 LRWD1Q9UFC0 647 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 AFF4Q9UHB7 1163 aaKnown RBP9.97□□□□□ -0.81
CPSF4-211ENST00000471455 FBXL5Q9UKA1 691 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 NDRG2Q9UN36 371 aaKnown RBP9.97□□□□□ -0.81
CPSF4-211ENST00000471455 PIAS3Q9Y6X2 628 aa9.97□□□□□ -0.81
CPSF4-211ENST00000471455 NOTCH4Q99466 2003 aa9.96□□□□□ -0.81
CPSF4-211ENST00000471455 FAM187AA6NFU0 413 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 ZNF263O14978 683 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 JAK2O60674 1132 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 CPB1P15086 417 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 FCARP24071 287 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 MARCKSP29966 332 aaPredicted RBP9.96□□□□□ -0.82
CPSF4-211ENST00000471455 GDI1P31150 447 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 ATXN1P54253 815 aaKnown RBP9.96□□□□□ -0.82
CPSF4-211ENST00000471455 PEX3P56589 373 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 OSTNP61366 133 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 STRN3Q13033 797 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 ZNF174Q15697 407 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 TSSK4Q6SA08 328 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 MPZL3Q6UWV2 235 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 C3orf58Q8NDZ4 430 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 FAM200AQ8TCP9 573 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 NETO1Q8TDF5 533 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 CSGALNACT1Q8TDX6 532 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 SNX29Q8TEQ0 813 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 TSC1Q92574 1164 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 SUSD3Q96L08 255 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 ACO2Q99798 780 aaKnown RBP9.96□□□□□ -0.82
CPSF4-211ENST00000471455 PLA2G2FQ9BZM2 168 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 SLITRK6Q9H5Y7 841 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 KMT5AQ9NQR1 393 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 KIAA1024Q9UPX6 916 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 DNM3Q9UQ16 869 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
CPSF4-211ENST00000471455 H0YCG3 227 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 SIAH2O43255 324 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 XPOTO43592 962 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 FGF19O95750 216 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 EDN1P05305 212 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 RETP07949 1114 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 MYL4P12829 197 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 CNR2P34972 360 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 NPTX2P47972 431 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 CXCL12P48061 93 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 NEK4P51957 841 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 SMTNP53814 917 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 HMGN5P82970 282 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 SOX4Q06945 474 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 TWF1Q12792 350 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 PDIA5Q14554 519 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 KRT79Q5XKE5 535 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 CD300LGQ6UXG3 332 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 ALKAL1Q6UXT8 129 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 PRR23BQ6ZRT6 265 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 HAUS6Q7Z4H7 955 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 USP37Q86T82 979 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 ZNF511Q8NB15 262 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 ZSCAN18Q8TBC5 510 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 DDX1Q92499 740 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 LLPHQ9BRT6 129 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 CXCL16Q9H2A7 254 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 C8orf33Q9H7E9 229 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 LMAN1LQ9HAT1 526 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 TRPV4Q9HBA0 871 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 ZNF334Q9HCZ1 680 aaPredicted RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 DDX19AQ9NUU7 478 aaKnown RBP9.95□□□□□ -0.82
CPSF4-211ENST00000471455 ARHGAP28Q9P2N2 729 aa9.95□□□□□ -0.82
CPSF4-211ENST00000471455 CITO14578 2027 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 COL4A3Q01955 1670 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 J3QL48 77 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 LAD1O00515 517 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 DTNBO60941 627 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 HIP1RO75146 1068 aa9.94□□□□□ -0.82
CPSF4-211ENST00000471455 TOM1L1O75674 476 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms