RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MIOSQ9NXC5 875 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 GDAP2Q9NXN4 497 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 ARHGAP20Q9P2F6 1191 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 BARX2Q9UMQ3 279 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 NR2E3Q9Y5X4 410 aa10.43□□□□□ -0.74
CCM2-204ENST00000470837 EPN1Q9Y6I3 576 aaPredicted RBP10.43□□□□□ -0.74
CCM2-204ENST00000470837 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 A8MXQ7 604 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 EIF3CLB5ME19 914 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 THAP12O43422 761 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TADA2AO75478 443 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ALDH2P05091 517 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 PAEPP09466 180 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 FAM163BP0C2L3 166 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 CD19P15391 556 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 CYP11B1P15538 503 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ITGB8P26012 769 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 GNL1P36915 607 aaPredicted RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 RAP1GAPP47736 663 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ALDH7A1P49419 539 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 AFF1P51825 1210 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 UPP1Q16831 310 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ZNF394Q53GI3 561 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 C10orf76Q5T2E6 689 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 PPP1R2P3Q6NXS1 205 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.42□□□□□ -0.74
CCM2-204ENST00000470837 OTOP2Q7RTS6 562 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TMEM139Q8IV31 216 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ADGRF2Q8IZF7 708 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TMEM86AQ8N2M4 240 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 CXorf38Q8TB03 319 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TMEM176AQ96HP8 235 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 HEXIM2Q96MH2 286 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 CASD1Q96PB1 797 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 YME1L1Q96TA2 773 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 EIF3CQ99613 913 aaKnown RBP10.42□□□□□ -0.74
CCM2-204ENST00000470837 AGPAT1Q99943 283 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 TMEM175Q9BSA9 504 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ZBED2Q9BTP6 218 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 GPR88Q9GZN0 384 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ADAMTS1Q9UHI8 967 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 KIAA1257Q9ULG3 409 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 FAN1Q9Y2M0 1017 aa10.42□□□□□ -0.74
CCM2-204ENST00000470837 ESPNB1AK53 854 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 PPEF2O14830 753 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 TACC1O75410 805 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 PLEKP08567 350 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 SYN1P17600 705 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 ACO1P21399 889 aaKnown RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 CLCN1P35523 988 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 LHX1P48742 406 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 NDST1P52848 882 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 CDH8P55286 799 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 WDR5P61964 334 aaKnown RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 CDR2Q01850 454 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 ELAVL2Q12926 359 aaKnown RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 SLC18A3Q16572 532 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 PAN2Q504Q3 1202 aaKnown RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 ARHGAP29Q52LW3 1261 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 CCDC122Q5T0U0 273 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 COL13A1Q5TAT6 717 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 TAF3Q5VWG9 929 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 E4F1Q66K89 784 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 HGSNATQ68CP4 663 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 FAM117BQ6P1L5 589 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 RAD9BQ6WBX8 426 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 TRIM72Q6ZMU5 477 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 ZNF571Q7Z3V5 609 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 SLC47A2Q86VL8 602 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 TNS4Q8IZW8 715 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 THEM5Q8N1Q8 247 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 EPS8L1Q8TE68 723 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 TOP1MTQ969P6 601 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 SENP8Q96LD8 212 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 TSGA10Q9BZW7 698 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 SPTLC3Q9NUV7 552 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 ZMYND8Q9ULU4 1186 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 PYCARDQ9ULZ3 195 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 CNTN6Q9UQ52 1028 aa10.41□□□□□ -0.74
CCM2-204ENST00000470837 PRG3Q9Y2Y8 225 aaPredicted RBP10.41□□□□□ -0.74
CCM2-204ENST00000470837 KRT86O43790 486 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 CILPO75339 1184 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 DGKIO75912 1065 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 DDHD2O94830 711 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 VDRP11473 427 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 PCSK1P29120 753 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 MAGEA1P43355 309 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 SLC8A3P57103 927 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 GFPT1Q06210 699 aaPredicted RBP10.4□□□□□ -0.74
CCM2-204ENST00000470837 DSC1Q08554 894 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 INCA1Q0VD86 236 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 KIF5AQ12840 1032 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 BTG3Q14201 252 aaPredicted RBP10.4□□□□□ -0.74
CCM2-204ENST00000470837 MTF1Q14872 753 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 STILQ15468 1287 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 NAB2Q15742 525 aa10.4□□□□□ -0.74
CCM2-204ENST00000470837 SOWAHAQ2M3V2 549 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms