RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 LRRC14BA6NHZ5 514 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 MPPED1O15442 326 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 ZRANB2O95218 330 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL11A1-208ENST00000470170 RPLP2P05387 115 aaKnown RBP6.97□□□□□ -1.29
COL11A1-208ENST00000470170 PPP3CBP16298 524 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 PIGFQ07326 219 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 CCDC93Q567U6 631 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 AKNAD1Q5T1N1 836 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 ZKSCAN2Q63HK3 967 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 SLC4A10Q6U841 1118 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 TTC7BQ86TV6 843 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 TRIB1Q96RU8 372 aa6.97□□□□□ -1.29
COL11A1-208ENST00000470170 ALG1L2C9J202 215 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 NT5C1B-RDH14C9J2C7 533 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 CHRM2P08172 466 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 LMO1P25800 156 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 PSMC1P62191 440 aaKnown RBP6.96□□□□□ -1.3
COL11A1-208ENST00000470170 MICALCLQ6ZW33 695 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 TMPRSS9Q7Z410 1059 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 SLC13A1Q9BZW2 595 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 MAN1C1Q9NR34 630 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 WASHC2CQ9Y4E1 1318 aa6.96□□□□□ -1.3
COL11A1-208ENST00000470170 ZNF785A8K8V0 405 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 ADM5C9JUS6 153 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 ANXA1P04083 346 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 ELFN1P0C7U0 828 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 CCND1P24385 295 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 HNRNPMP52272 730 aaKnown RBP eCLIP6.95□□□□□ -1.3
COL11A1-208ENST00000470170 POU6F2P78424 691 aaPredicted RBP6.95□□□□□ -1.3
COL11A1-208ENST00000470170 SLC30A10Q6XR72 485 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 UROC1Q96N76 676 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 SMOQ99835 787 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 ASPSCR1Q9BZE9 553 aa6.95□□□□□ -1.3
COL11A1-208ENST00000470170 POLRMTO00411 1230 aaKnown RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 RBMXL2O75526 392 aaKnown RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 GRIA3P42263 894 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 NHLH1Q02575 133 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 HLXQ14774 488 aaPredicted RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 NBPF8Q3BBV2 869 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 MIER2Q8N344 545 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 B3GALNT2Q8NCR0 500 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 PGBD1Q96JS3 809 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 BRD9Q9H8M2 597 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 SLAMF7Q9NQ25 335 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 ARPP21Q9UBL0 812 aaPredicted RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 FRMD4BQ9Y2L6 1034 aa6.94□□□□□ -1.3
COL11A1-208ENST00000470170 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.94□□□□□ -1.3
COL11A1-208ENST00000470170 E7ENX8 843 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 ORC4O43929 436 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 GJB1P08034 283 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 GNAI3P08754 354 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 LPOP22079 712 aaPredicted RBP6.93□□□□□ -1.3
COL11A1-208ENST00000470170 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 PHKA1P46020 1223 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 NPTX2P47972 431 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 GNAI1P63096 354 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 TAP2Q03519 686 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 PTPRRQ15256 657 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 TSTD2Q5T7W7 516 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 GRASPQ7Z6J2 395 aaPredicted RBP6.93□□□□□ -1.3
COL11A1-208ENST00000470170 PDSS2Q86YH6 399 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 POC1BQ8TC44 478 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 SCAMP4Q969E2 229 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 C1orf43Q9BWL3 253 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 CPNE5Q9HCH3 593 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 SIDT1Q9NXL6 827 aaKnown RBP6.93□□□□□ -1.3
COL11A1-208ENST00000470170 PCDHA3Q9Y5H8 950 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 ENTPD2Q9Y5L3 495 aa6.93□□□□□ -1.3
COL11A1-208ENST00000470170 CCDC151A5D8V7 595 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 LINC00473A8K010 186 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 VWC2LB2RUY7 222 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 CYP2C19P33261 490 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 ZNF135P52742 658 aaPredicted RBP6.92□□□□□ -1.3
COL11A1-208ENST00000470170 PROK1P58294 105 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 FAM9AQ8IZU1 332 aaPredicted RBP6.92□□□□□ -1.3
COL11A1-208ENST00000470170 C3orf20Q8ND61 904 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 SMOC2Q9H3U7 446 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 ETAA1Q9NY74 926 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 COL4A3BPQ9Y5P4 624 aa6.92□□□□□ -1.3
COL11A1-208ENST00000470170 PROP1O75360 226 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 RHOP08100 348 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 PRDX5P30044 214 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 PIK3CGP48736 1102 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 FXR1P51114 621 aaKnown RBP eCLIP6.91□□□□□ -1.3
COL11A1-208ENST00000470170 TIMP4Q99727 224 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 PCDH12Q9NPG4 1184 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 GNL3LQ9NVN8 582 aaKnown RBP6.91□□□□□ -1.3
COL11A1-208ENST00000470170 RLIMQ9NVW2 624 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 CFAP97Q9P2B7 532 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 ST3GAL5Q9UNP4 418 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 AGAP1Q9UPQ3 857 aa6.91□□□□□ -1.3
COL11A1-208ENST00000470170 A0A0B4J269 797 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 WDR27A2RRH5 827 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 F5H697 171 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 VPS4BO75351 444 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 CHRM3P20309 590 aa6.9□□□□□ -1.3
COL11A1-208ENST00000470170 PDCP20941 246 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms