RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 MLF2Q15773 248 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-208ENST00000469802 NT5DC4Q86YG4 428 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 HS6ST3Q8IZP7 471 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 PJA1Q8NG27 643 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 OR10T2Q8NGX3 314 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 ELSPBP1Q96BH3 223 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 ACCSQ96QU6 501 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 LRRC3Q9BY71 257 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 PLA2G2FQ9BZM2 168 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 DNAJC25Q9H1X3 360 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 TBC1D7Q9P0N9 293 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 EXOC7Q9UPT5 735 aa17.65■□□□□ 0.42
COL9A3-208ENST00000469802 SPTLC2O15270 562 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 GFRA3O60609 400 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 PPP6R2O75170 966 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 IL18RAPO95256 599 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 RFX1P22670 979 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 PLD1Q13393 1074 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 STK38Q15208 465 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 FAM78AQ5JUQ0 283 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 TANGO2Q6ICL3 276 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 IQCEQ6IPM2 695 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 CENPPQ6IPU0 288 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 TMC8Q8IU68 726 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 BRSK2Q8IWQ3 736 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 ZSWIM2Q8NEG5 633 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 SHDQ96IW2 340 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 ZNF512Q96ME7 567 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-208ENST00000469802 ASB16Q96NS5 453 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 PGLYRP2Q96PD5 576 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 TMEM209Q96SK2 561 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 FOXQ1Q9C009 403 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 TNMDQ9H2S6 317 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 ASAH2Q9NR71 780 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 DPP3Q9NY33 737 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 HSFX1Q9UBD0 423 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 SIT1Q9Y3P8 196 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 PCDHB13Q9Y5F0 798 aa17.64■□□□□ 0.41
COL9A3-208ENST00000469802 STK25O00506 426 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 YEATS4O95619 227 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 IDEP14735 1019 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 GLULP15104 373 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 GARTP22102 1010 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 TAF6P49848 677 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 DUSP4Q13115 394 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 SNW1Q13573 536 aaKnown RBP17.63■□□□□ 0.41
COL9A3-208ENST00000469802 CYP4A22Q5TCH4 519 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 TTC9BQ8N6N2 239 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 PDILTQ8N807 584 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 BORCS6Q96GS4 357 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-208ENST00000469802 PANK4Q9NVE7 773 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 KBTBD4Q9NVX7 518 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 DSEQ9UL01 958 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 FAM186AA6NE01 2351 aa17.63■□□□□ 0.41
COL9A3-208ENST00000469802 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 KANSL1LA0AUZ9 987 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 PRR23AA6NEV1 266 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 DCNP07585 359 aaKnown RBP17.62■□□□□ 0.41
COL9A3-208ENST00000469802 SLC44A4Q53GD3 710 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 ASCL5Q7RTU5 278 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 FRMD5Q7Z6J6 570 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 ATAD1Q8NBU5 361 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 SHKBP1Q8TBC3 707 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 DNASE1L2Q92874 299 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 ZSWIM3Q96MP5 696 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 FAM213AQ9BRX8 229 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 ZCWPW1Q9H0M4 648 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 CUEDC2Q9H467 287 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 TRPV4Q9HBA0 871 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 NCANO14594 1321 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 PTPRDP23468 1912 aa17.62■□□□□ 0.41
COL9A3-208ENST00000469802 RIF1Q5UIP0 2472 aaKnown RBP17.62■□□□□ 0.41
COL9A3-208ENST00000469802 SHISA7A6NL88 538 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 LRRN2O75325 713 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 MYL4P12829 197 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 ARMCX5Q6P1M9 558 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 CNNM4Q6P4Q7 775 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 SHC4Q6S5L8 630 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 CCDC65Q8IXS2 484 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 GLIS3Q8NEA6 775 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 CXorf38Q8TB03 319 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 SMARCD2Q92925 531 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 SAAL1Q96ER3 474 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 ZNF560Q96MR9 790 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
COL9A3-208ENST00000469802 CBWD1Q9BRT8 395 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 OSBPL6Q9BZF3 934 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 TRIM9Q9C026 710 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 ZFP14Q9HCL3 533 aa17.61■□□□□ 0.41
COL9A3-208ENST00000469802 RBAKQ9NYW8 714 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-208ENST00000469802 TFIP11Q9UBB9 837 aaKnown RBP17.61■□□□□ 0.41
COL9A3-208ENST00000469802 GREB1Q4ZG55 1949 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 F5P12259 2224 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 KPNA7A9QM74 516 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 CYB561D2O14569 222 aa17.6■□□□□ 0.41
COL9A3-208ENST00000469802 EXTL3O43909 919 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms