RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NCAPHQ15003 741 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 PTPN14Q15678 1187 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF699Q32M78 642 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 LMBRD2Q68DH5 695 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 LRSAM1Q6UWE0 723 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 LNX1Q8TBB1 728 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 HASPINQ8TF76 798 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 HDAC7Q8WUI4 952 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 JAKMIP2Q96AA8 810 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 TLE6Q9H808 572 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 SNX9Q9Y5X1 595 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 ANK1P16157 1881 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 NLRC5Q86WI3 1866 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 F8W810 466 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 GOLGA6L19H0YKK7 550 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 RFXAPO00287 272 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 SPTLC1O15269 473 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 VNN1O95497 513 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 FOSL2P15408 326 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF18P17022 549 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 IGFBP4P22692 258 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 BRCC3P46736 316 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 MYL7Q01449 175 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 ADGRE1Q14246 886 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 IQCB1Q15051 598 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 VWA3BQ502W6 1294 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 RTP2Q5QGT7 225 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 VARS2Q5ST30 1063 aaKnown RBP13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 OVOS1Q6IE37 1185 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 SLC8B1Q6J4K2 584 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF280DQ6N043 979 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 TAS1R1Q7RTX1 841 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 FAM200AQ8TCP9 573 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 TAS1R2Q8TE23 839 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 FAM161BQ96MY7 647 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 GUCD1Q96NT3 240 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 TSPY26PQ9H489 355 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 SAMSN1Q9NSI8 373 aaKnown RBP13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 MTRRQ9UBK8 725 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 CACNG4Q9UBN1 327 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 LIMA1Q9UHB6 759 aaKnown RBP13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
SPTLC1-204ENST00000469778 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 GABRDO14764 452 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 PPEF2O14830 753 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 PCSK1P29120 753 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 TKTP29401 623 aaKnown RBP13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 RAB33AQ14088 237 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 PSMD5Q16401 504 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 TPGS2Q68CL5 300 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 TMEM184AQ6ZMB5 413 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 GBP6Q6ZN66 633 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 Q7L0L9 218 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 AOPEPQ8N6M6 819 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 KLHL5Q96PQ7 755 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 MMS19Q96T76 1030 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 ACBD6Q9BR61 282 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 HSFX1Q9UBD0 423 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 CHD7Q9P2D1 2997 aa13.54□□□□□ -0.24
SPTLC1-204ENST00000469778 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 TRANK1O15050 2925 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 I3L4J1 428 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CNPP09543 421 aaKnown RBP13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 KLRC2P26717 231 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 IRS1P35568 1242 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 YWHAEP62258 255 aaKnown RBP13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 DUSP6Q16828 381 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 SOWAHAQ2M3V2 549 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CBWD6Q4V339 395 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CBWD3Q5JTY5 395 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CBWD5Q5RIA9 395 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 FKBP15Q5T1M5 1219 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 PLPP4Q5VZY2 271 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 ENOSF1Q7L5Y1 443 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 UNC93AQ86WB7 457 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 PDCL2Q8N4E4 241 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 EFHBQ8N7U6 833 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF461Q8TAF7 563 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 C2orf15Q8WU43 125 aaKnown RBP13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 NIF3L1Q9GZT8 377 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
SPTLC1-204ENST00000469778 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms