RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SLCO1A2P46721 670 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 SARNPP82979 210 aaKnown RBP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 SPIRE1Q08AE8 756 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 CALCOCO2Q13137 446 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 PPIGQ13427 754 aaKnown RBP eCLIP10.19□□□□□ -0.783e-6■■□□□ 12.7
HDAC3-205ENST00000469550 CCDC38Q502W7 563 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 ARHGEF18Q6ZSZ5 1173 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 FAM186BQ8IYM0 893 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 ADGRF4Q8IZF3 695 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 ZDHHC14Q8IZN3 488 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 AGGF1Q8N302 714 aaeCLIP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 MICAL1Q8TDZ2 1067 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 FBF1Q8TES7 1133 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 PRCCQ92733 491 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 NAF1Q96HR8 494 aaKnown RBP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 CCDC113Q9H0I3 377 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 LRRC19Q9H756 370 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 ZFATQ9P243 1243 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 RPL26L1Q9UNX3 145 aaKnown RBP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 GNEQ9Y223 722 aaKnown RBP10.19□□□□□ -0.78
HDAC3-205ENST00000469550 Q9Y3F1 56 aa10.19□□□□□ -0.78
HDAC3-205ENST00000469550 ZBTB5O15062 677 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 AHCYL1O43865 530 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 CABYRO75952 493 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 ITIH2P19823 946 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 GPC5P78333 572 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 CNTN2Q02246 1040 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 CTTNQ14247 550 aaKnown RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 SPDYAQ5MJ70 313 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 GPATCH4Q5T3I0 446 aaKnown RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 UBAP2Q5T6F2 1119 aaKnown RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 RHBDF2Q6PJF5 856 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 POTEGQ6S5H5 508 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 SYDE1Q6ZW31 735 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 SLC13A5Q86YT5 568 aaPredicted RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 DCAF4Q8WV16 495 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 MYLIPQ8WY64 445 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 INPP5DQ92835 1189 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 GJA10Q969M2 543 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 AGPAT1Q99943 283 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 LRMDAQ9H2I8 198 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 CDC42EP4Q9H3Q1 356 aaKnown RBP10.18□□□□□ -0.78
HDAC3-205ENST00000469550 KIF9Q9HAQ2 790 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 APEX2Q9UBZ4 518 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 LGALS13Q9UHV8 139 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 CUL9Q8IWT3 2517 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 UBE4BO95155 1302 aa10.18□□□□□ -0.78
HDAC3-205ENST00000469550 TLR3O15455 904 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 MAGEB2O15479 319 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 ECEL1O95672 775 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 SPATA31C1P0DKV0 1188 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CALB2P22676 271 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 ABL2P42684 1182 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CAV1Q03135 178 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TNFAIP2Q03169 654 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 AP3B2Q13367 1082 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 LRRC14Q15048 493 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TAF11Q15544 211 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 KCTD19Q17RG1 926 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 GNASQ5JWF2 1037 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 PPP1R21Q6ZMI0 780 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CCDC105Q8IYK2 499 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 KIF2BQ8N4N8 673 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 ETNPPLQ8TBG4 499 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CRYGNQ8WXF5 182 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 KRT35Q92764 455 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CD101Q93033 1021 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 RNPEPL1Q9HAU8 725 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 HOMER2Q9NSB8 354 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 CYP39A1Q9NYL5 469 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 PRR12Q9ULL5 1215 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 STK38LQ9Y2H1 464 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 PCDHB13Q9Y5F0 798 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 KLHL33A6NCF5 533 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 A8MUI8 341 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TBCAO75347 108 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 GCNT3O95395 438 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TTC4O95801 387 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 ICAM1P05362 532 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 LINGO3P0C6S8 592 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 FOSL2P15408 326 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 DNAJB2P25686 324 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 STX2P32856 288 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 YARSP54577 528 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 PSMC6P62333 389 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 MRPS35P82673 323 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 SF3A3Q12874 501 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■■■□ 20.9
HDAC3-205ENST00000469550 STRN3Q13033 797 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 LBRQ14739 615 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 SIX1Q15475 284 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 LONRF1Q17RB8 773 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 Q4G0T1 1027 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TMEM240Q5SV17 173 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 IQSEC1Q6DN90 963 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 PSRC1Q6PGN9 363 aaPredicted RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 C16orf59Q7L2K0 433 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 TMEM199Q8N511 208 aa10.17□□□□□ -0.78
HDAC3-205ENST00000469550 ENDOVQ8N8Q3 282 aaKnown RBP10.17□□□□□ -0.78
HDAC3-205ENST00000469550 UHMK1Q8TAS1 419 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms