RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 MAPK6Q16659 721 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 CTXN3Q4LDR2 81 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 GPR158Q5T848 1215 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 TRIM68Q6AZZ1 485 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 NOSTRINQ8IVI9 506 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 OR2I1PQ8NGU4 316 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 PIP4K2CQ8TBX8 421 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 CAMK1GQ96NX5 476 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 PPP1R10Q96QC0 940 aaKnown RBP13.88□□□□□ -0.19
HDAC6-217ENST00000469223 SMG9Q9H0W8 520 aaKnown RBP13.88□□□□□ -0.19
HDAC6-217ENST00000469223 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
HDAC6-217ENST00000469223 ANK1P16157 1881 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 TTLL13PA6NNM8 815 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 H7C4K7 107 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 ARHGAP6O43182 974 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 DRD1P21728 446 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 GLRA2P23416 452 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 PTGER3P43115 390 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 ABCG1P45844 678 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 POU5F1BQ06416 359 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 TRIP6Q15654 476 aaKnown RBP13.87□□□□□ -0.19
HDAC6-217ENST00000469223 TMEM132AQ24JP5 1023 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 ZNF280DQ6N043 979 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 RNF19BQ6ZMZ0 732 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 SYT12Q8IV01 421 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 TMEFF1Q8IYR6 380 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 EZH1Q92800 747 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-217ENST00000469223 UROC1Q96N76 676 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 NFKBIZQ9BYH8 718 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 DNAJC25Q9H1X3 360 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 ATXN3LQ9H3M9 355 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 EBF3Q9H4W6 596 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 VAV3Q9UKW4 847 aa13.87□□□□□ -0.19
HDAC6-217ENST00000469223 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-217ENST00000469223 A0A087WV48 116 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 TNFRSF10BO14763 440 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 N4BP3O15049 544 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 ZBTB39O15060 712 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 SGSM2O43147 1006 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 P4HBP07237 508 aaKnown RBP13.86□□□□□ -0.19
HDAC6-217ENST00000469223 CD59P13987 128 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 CYP4F8P98187 520 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 SOX4Q06945 474 aaPredicted RBP13.86□□□□□ -0.19
HDAC6-217ENST00000469223 PSMD2Q13200 908 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 RUNX3Q13761 415 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 HNRNPDQ14103 355 aaKnown RBP13.86□□□□□ -0.19
HDAC6-217ENST00000469223 FBXO43Q4G163 708 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 SLC23A3Q6PIS1 610 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 GAREM2Q75VX8 874 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 LPCAT2Q7L5N7 544 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 TTC30AQ86WT1 665 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 MINDY1Q8N5J2 469 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 MDGA1Q8NFP4 955 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 CNOT6LQ96LI5 555 aaKnown RBP13.86□□□□□ -0.19
HDAC6-217ENST00000469223 TCEANC2Q96MN5 208 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 GKN1Q9NS71 199 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 THG1LQ9NWX6 298 aaKnown RBP13.86□□□□□ -0.19
HDAC6-217ENST00000469223 DKK4Q9UBT3 224 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 TPCN1Q9ULQ1 816 aa13.86□□□□□ -0.19
HDAC6-217ENST00000469223 DOPEY2Q9Y3R5 2298 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 LRRK2Q5S007 2527 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 LRRIQ4A6NIV6 560 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 SYN3O14994 580 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 VNN2O95498 520 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 ARSAP15289 507 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 GABRR2P28476 465 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 GALK1P51570 392 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 PLD1Q13393 1074 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 ARHGAP15Q53QZ3 475 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 LYSMD4Q5XG99 296 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 PPP4R3CPQ6ZMV5 832 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 RASSF3Q86WH2 238 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 SKAP1Q86WV1 359 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 C4orf19Q8IY42 314 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 PRIMPOLQ96LW4 560 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 PGLYRP2Q96PD5 576 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 P2RY13Q9BPV8 354 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 FAM83CQ9BQN1 747 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-217ENST00000469223 SLKQ9H2G2 1235 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-217ENST00000469223 CRISPLD1Q9H336 500 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-217ENST00000469223 NAP1L2Q9ULW6 460 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-217ENST00000469223 USP20Q9Y2K6 914 aa13.85□□□□□ -0.19
HDAC6-217ENST00000469223 KLF18A0A0U1RQI7 1052 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 PODXLO00592 558 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 SLC27A2O14975 620 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 SLC37A4O43826 429 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 SH3BP5O60239 455 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 CDC45O75419 566 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 ITPKAP23677 461 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 ARL2P36404 184 aa13.84□□□□□ -0.19
HDAC6-217ENST00000469223 ANP32AP39687 249 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms