RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ASAP3Q8TDY4 903 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
NUP50-214ENST00000469163 NCSTNQ92542 709 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 HAS1Q92839 578 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 WDR18Q9BV38 432 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 EPB41L5Q9HCM4 733 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 STOML1Q9UBI4 398 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 PNMA3Q9UL41 463 aa10.49□□□□□ -0.73
NUP50-214ENST00000469163 RASA4BC9J798 803 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 RASA4O43374 803 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 FAM26FQ5R3K3 315 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 TMTC1Q8IUR5 882 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 IFT20Q8IY31 132 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 SCG3Q8WXD2 468 aaKnown RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 LPAR1Q92633 364 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 KIAA1683Q9H0B3 1180 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 PALMDQ9NP74 551 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 SMARCAL1Q9NZC9 954 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.48□□□□□ -0.73
NUP50-214ENST00000469163 DYNC1LI2O43237 492 aaPredicted RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 FOSP01100 380 aaPredicted RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 TXNP10599 105 aaKnown RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 UBL4AP11441 157 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 VHLP40337 213 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 MXI1P50539 228 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 POLGP54098 1239 aaPredicted RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 RELAQ04206 551 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 MORC3Q14149 939 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 E2F2Q14209 437 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 ITIH4Q14624 930 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 CTC1Q2NKJ3 1217 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 HS2ST1Q7LGA3 356 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 LRRC34Q8IZ02 419 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 ST13P4Q8IZP2 240 aaPredicted RBP10.48□□□□□ -0.73
NUP50-214ENST00000469163 DDHD1Q8NEL9 900 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 CAVIN3Q969G5 261 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 VPS50Q96JG6 964 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 SPATC1LQ9H0A9 340 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 TMBIM4Q9HC24 238 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 SH3GLB2Q9NR46 395 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 LZTS1Q9Y250 596 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
NUP50-214ENST00000469163 MACROD2A1Z1Q3 448 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 MATN2O00339 956 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 XPOTO43592 962 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 PEX11AO75192 247 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 BMP6P22004 513 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 TRAPPC10P48553 1259 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 PMS1P54277 932 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 SPAG1Q07617 926 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 BCL2A1Q16548 175 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 DNAAF5Q86Y56 855 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 C1orf131Q8NDD1 294 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 GMCL1P1Q8NEA9 526 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 TSG101Q99816 390 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 NSRP1Q9H0G5 558 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 SMCHD1A6NHR9 2005 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 IGKV6D-41A0A0C4DH26 115 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ZSCAN5CA6NGD5 496 aaPredicted RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 TNPO2O14787 897 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 CXCR5P32302 372 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 SERPINB8P50452 374 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 KPNB1Q14974 876 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 SPERTQ8NA61 448 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ZNF333Q96JL9 665 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 EXOC3O60645 756 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 AOC2O75106 756 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 DGKIO75912 1065 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 LMNAP02545 664 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 LYNP07948 512 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ATICP31939 592 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 KLK7P49862 253 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 STXBP2Q15833 593 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ARHGAP44Q17R89 818 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 KRT71Q3SY84 523 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 SNX30Q5VWJ9 437 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 CHADLQ6NUI6 762 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 PRR23CQ6ZRP0 262 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 MARK2Q7KZI7 788 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 OSCP1Q8WVF1 389 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 UBLCP1Q8WVY7 318 aaPredicted RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 IQCDQ96DY2 449 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 SPATA33Q96N06 139 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 RUSC1Q9BVN2 902 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 ARHGEF3Q9NR81 526 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 HBS1LQ9Y450 684 aaKnown RBP10.47□□□□□ -0.73
NUP50-214ENST00000469163 ADAMTSL1Q8N6G6 1762 aa10.47□□□□□ -0.73
NUP50-214ENST00000469163 INO80B-WBP1J3KQ70 363 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 TNFRSF10AO00220 468 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 FOXD2O60548 495 aaPredicted RBP10.46□□□□□ -0.73
NUP50-214ENST00000469163 TSPAN9O75954 239 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 ALDH2P05091 517 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 ZNF286BP0CG31 522 aa10.46□□□□□ -0.73
NUP50-214ENST00000469163 PHBP35232 272 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms