RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SEZ6LQ9BYH1 1024 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 RNF208Q9H0X6 261 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 SNX12Q9UMY4 172 aa20.23■□□□□ 0.83
SMC4-209ENST00000468653 SRGAP2O75044 1071 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CFHP08603 1231 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CCL5P13501 91 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CD19P15391 556 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CYP3A5P20815 502 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 RAB27AP51159 221 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 DAAM2Q86T65 1068 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 TTC39CQ8N584 583 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CEP112Q8N8E3 955 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 LRRC57Q8N9N7 239 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 TLR10Q9BXR5 811 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 GTF3C4Q9UKN8 822 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 HYOU1Q9Y4L1 999 aa20.22■□□□□ 0.83
SMC4-209ENST00000468653 CILPO75339 1184 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 PAEPP09466 180 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 CENPCQ03188 943 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 MEI1Q5TIA1 1274 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 PPP1R2P3Q6NXS1 205 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 LRRN4CLQ8ND94 238 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 TRIM11Q96F44 468 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 CALR3Q96L12 384 aaKnown RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 ZFP42Q96MM3 310 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 RPS6KC1Q96S38 1066 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 FAM124BQ9H5Z6 455 aaPredicted RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 ATMINO43313 823 aaPredicted RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 MED7O43513 233 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 MGEA5O60502 916 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 CYP1A2P05177 515 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 PRLRP16471 622 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 TCP1P17987 556 aaKnown RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 PNPLA4P41247 253 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 RAD23BP54727 409 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 NOMO3P69849 1222 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 DSC3Q14574 896 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 TCEAL1Q15170 157 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 MRPL10Q7Z7H8 261 aaKnown RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 MCOLN2Q8IZK6 566 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 LPPQ93052 612 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 TMEM176AQ96HP8 235 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 ZNF560Q96MR9 790 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 ADAM2Q99965 735 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 BARX2Q9UMQ3 279 aaPredicted RBP20.21■□□□□ 0.83
SMC4-209ENST00000468653 COG5Q9UP83 839 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 GIT1Q9Y2X7 761 aa20.21■□□□□ 0.83
SMC4-209ENST00000468653 MEIS3P2A8K0S8 358 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 PIRO00625 290 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 PTGESO14684 152 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 BUB1BO60566 1050 aaPredicted RBP20.2■□□□□ 0.82
SMC4-209ENST00000468653 MYBL1P10243 752 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 MLH1P40692 756 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 HADHBP55084 474 aaKnown RBP20.2■□□□□ 0.82
SMC4-209ENST00000468653 SOX4Q06945 474 aaPredicted RBP20.2■□□□□ 0.82
SMC4-209ENST00000468653 PEX26Q7Z412 305 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 RNF169Q8NCN4 708 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 WHAMMQ8TF30 809 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 TFAP2BQ92481 460 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 CAPZA3Q96KX2 299 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 OSBPL9Q96SU4 736 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 GAD1Q99259 594 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 TRAIPQ9BWF2 469 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 ELOVL4Q9GZR5 314 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 GOLPH3Q9H4A6 298 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 GOLGA2P5Q9HBQ8 144 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 SLC38A7Q9NVC3 462 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 CNOT8Q9UFF9 292 aaKnown RBP20.2■□□□□ 0.82
SMC4-209ENST00000468653 CEP83Q9Y592 693 aa20.2■□□□□ 0.82
SMC4-209ENST00000468653 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 ZNF623O75123 536 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 LSM8O95777 96 aaKnown RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 TFRCP02786 760 aaKnown RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 SKIP12755 728 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 IBSPP21815 317 aaPredicted RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 CDK7P50613 346 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 NDST1P52848 882 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 INCA1Q0VD86 236 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 ORC1Q13415 861 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 LIN9Q5TKA1 542 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 SLFN11Q7Z7L1 901 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 SLC4A11Q8NBS3 891 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 CAGE1Q8TC20 777 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 TSC1Q92574 1164 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 PPP1R10Q96QC0 940 aaKnown RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 PSMB7Q99436 277 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 ZSWIM1Q9BR11 485 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 NUP85Q9BW27 656 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 HMGXB4Q9UGU5 601 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 CHORDC1Q9UHD1 332 aaPredicted RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 OGDHLQ9ULD0 1010 aa20.19■□□□□ 0.82
SMC4-209ENST00000468653 PDCD11Q14690 1871 aaKnown RBP20.19■□□□□ 0.82
SMC4-209ENST00000468653 A0A0U1RQF3 1178 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 TAF6P49848 677 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 DNA2P51530 1060 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 RPS6KA1Q15418 735 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 TMEM35BQ8NCS4 154 aa20.18■□□□□ 0.82
SMC4-209ENST00000468653 PGBD4Q96DM1 585 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms