RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 CEP55Q53EZ4 464 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PRAMEF19Q5SWL8 479 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 FOXB2Q5VYV0 432 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ADALQ6DHV7 355 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PPP4R3AQ6IN85 833 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CAVIN1Q6NZI2 390 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SHC4Q6S5L8 630 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CCDC73Q6ZRK6 1079 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 USP49Q70CQ1 688 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TRMT1LQ7Z2T5 733 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PDILTQ8N807 584 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM133AQ8N9E0 248 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 CD99L2Q8TCZ2 262 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 GPT2Q8TD30 523 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 MRPS27Q92552 414 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 HAS1Q92839 578 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 FERMT2Q96AC1 680 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 KIRREL1Q96J84 757 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 EPSTI1Q96J88 318 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 EXOC2Q96KP1 924 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 RNPC3Q96LT9 517 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 JMJD8Q96S16 334 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ZNF577Q9BSK1 485 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 DHRS4Q9BTZ2 278 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ARHGAP39Q9C0H5 1083 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 GOLPH3LQ9H4A5 285 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TTC12Q9H892 705 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 ZCCHC17Q9NP64 241 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 JADE2Q9NQC1 790 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC5A4Q9NY91 659 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 LRWD1Q9UFC0 647 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TCEAL9Q9UHQ7 104 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 GPR160Q9UJ42 338 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 FBXO2Q9UK22 296 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PCDHA12Q9UN75 941 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 TMA7Q9Y2S6 64 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 MRPS23Q9Y3D9 190 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 UBIAD1Q9Y5Z9 338 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 MRPL42Q9Y6G3 142 aaKnown RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 PTPRFP10586 1907 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 RLFQ13129 1914 aa4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 COL11A1P12107 1806 aaPredicted RBP4.56□□□□□ -1.68
TMEM39A-204ENST00000468545 LOC285556D6RIA3 1793 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ELP1O95163 1332 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RPTORQ8N122 1335 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ADGRA2Q96PE1 1338 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ASB14A6NK59 587 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 LAD1O00515 517 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 POLR2DO15514 142 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 PSPNO60542 156 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 GAS7O60861 476 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ATP9AO75110 1047 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 EIF3JO75822 258 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 PAPLNO95428 1278 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 PFKFB1P16118 471 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 JUNBP17275 347 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CMA1P23946 247 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CTGFP29279 349 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TRHRP34981 398 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 LONP1P36776 959 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CCT6AP40227 531 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RGS2P41220 211 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 SYKP43405 635 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 NDUFA8P51970 172 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 GHRHRQ02643 423 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 SQSTM1Q13501 440 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 MTMR1Q13613 665 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 GRB14Q14449 540 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 KARSQ15046 597 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CCL14Q16627 93 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 LY6KQ17RY6 165 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 FAM209AQ5JX71 171 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TMEM63BQ5T3F8 832 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 LRCH2Q5VUJ6 765 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RRAGBQ5VZM2 374 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 RESP18Q5W5W9 173 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 KRT79Q5XKE5 535 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ARL6IP4Q66PJ3 421 aaKnown RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 MBLAC2Q68D91 279 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DENND5AQ6IQ26 1287 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 XRRA1Q6P2D8 792 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 MOXD1Q6UVY6 613 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ARMCX2Q7L311 632 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 MIER3Q7Z3K6 550 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CABP7Q86V35 215 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CPNE8Q86YQ8 564 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CCDC103Q8IW40 242 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 TPH2Q8IWU9 490 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 FBXO16Q8IX29 292 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DNERQ8NFT8 737 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 ABHD4Q8TB40 342 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 STAMQ92783 540 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DIO2Q92813 273 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 KISS1RQ969F8 398 aaPredicted RBP4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DHX58Q96C10 678 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 DYDC2Q96IM9 177 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 CDK5RAP3Q96JB5 506 aa4.55□□□□□ -1.68
TMEM39A-204ENST00000468545 MBOAT7Q96N66 472 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms