RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 DOCK8Q8NF50 2099 aa12.1□□□□□ -0.47
COL4A6-205ENST00000468338 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 I3L4J1 428 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 M0QZQ0 153 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 PIRO00625 290 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 KIAA0391O15091 583 aaKnown RBP12.09□□□□□ -0.47
COL4A6-205ENST00000468338 TGFB1I1O43294 461 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
COL4A6-205ENST00000468338 NFICP08651 508 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 JUNDP17535 347 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 CASP1P29466 404 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 CUL4BQ13620 913 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 PTPRNQ16849 979 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 JADE1Q6IE81 842 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 SLC8B1Q6J4K2 584 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 ADGRD1Q6QNK2 874 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 RSPO2Q6UXX9 243 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-205ENST00000468338 STXBP4Q6ZWJ1 553 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 RTL10Q7L3V2 364 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 PALB2Q86YC2 1186 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 NT5DC4Q86YG4 428 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 RNF135Q8IUD6 432 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 BRSK2Q8IWQ3 736 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 KREMEN2Q8NCW0 462 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 ZSWIM2Q8NEG5 633 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 SCFD1Q8WVM8 642 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 ZNF707Q96C28 371 aaPredicted RBP12.09□□□□□ -0.47
COL4A6-205ENST00000468338 CBWD1Q9BRT8 395 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 BLZF1Q9H2G9 400 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 PCDHB3Q9Y5E6 796 aa12.09□□□□□ -0.47
COL4A6-205ENST00000468338 TECTAO75443 2155 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 RFPL2O75678 378 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 ABLIM3O94929 683 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 IL18RAPO95256 599 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 MYL1P05976 194 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 WEE2P0C1S8 567 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 ALADP13716 330 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 PAX3P23760 479 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 CTHP32929 405 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 OR1D2P34982 312 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 AFMP43652 599 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 GUCY2FP51841 1108 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 WNT7BP56706 349 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 TMEM132DQ14C87 1099 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 ELMSAN1Q6PJG2 1045 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 GLYCTKQ8IVS8 523 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 EFCAB13Q8IY85 973 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 CEP57L1Q8IYX8 460 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 SYCP3Q8IZU3 236 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 BEST2Q8NFU1 509 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 RPGRIP1Q96KN7 1286 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 NUB1Q9Y5A7 615 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 CDY1Q9Y6F8 540 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 UBE4BO95155 1302 aa12.08□□□□□ -0.48
COL4A6-205ENST00000468338 CCDC195A0A1B0GUA6 201 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 PPEF2O14830 753 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 DCXO43602 365 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 EXTL3O43909 919 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 OAZ2O95190 189 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 F12P00748 615 aaPredicted RBP12.07□□□□□ -0.48
COL4A6-205ENST00000468338 POU2F2P09086 479 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 SPATA31D3P0C874 917 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 HOXA9P31269 272 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 MCM4P33991 863 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 SYKP43405 635 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 NDUFA8P51970 172 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 LILRA4P59901 499 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
COL4A6-205ENST00000468338 UVSSAQ2YD98 709 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 C9orf57Q5W0N0 161 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 SPATA31D4Q6ZUB0 917 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 GRAMD1CQ8IYS0 662 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 ARMC2Q8NEN0 867 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 ZNF461Q8TAF7 563 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 CXorf38Q8TB03 319 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 BORCS6Q96GS4 357 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 NOTCH4Q99466 2003 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 FAM213AQ9BRX8 229 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 C1QTNF1Q9BXJ1 281 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
COL4A6-205ENST00000468338 WDR6Q9NNW5 1121 aaKnown RBP12.07□□□□□ -0.48
COL4A6-205ENST00000468338 H7C4K7 107 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 HNRNPA1P09651 372 aaKnown RBP eCLIP12.06□□□□□ -0.48
COL4A6-205ENST00000468338 TYMPP19971 482 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 ROR1Q01973 937 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 STK4Q13043 487 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 PSMD2Q13200 908 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 ARMCX5Q6P1M9 558 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 C12orf56Q8IXR9 622 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 ZDHHC14Q8IZN3 488 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 GPD1LQ8N335 351 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 OXCT2Q9BYC2 517 aaPredicted RBP12.06□□□□□ -0.48
COL4A6-205ENST00000468338 GOLPH3LQ9H4A5 285 aa12.06□□□□□ -0.48
COL4A6-205ENST00000468338 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms