RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GPR17Q13304 367 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 HTR4Q13639 388 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 MYBPC2Q14324 1141 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 GRAMD1CQ8IYS0 662 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 SLC44A3Q8N4M1 653 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 NOC3LQ8WTT2 800 aaKnown RBP18.47■□□□□ 0.55
SSBP1-207ENST00000468267 FGF13Q92913 245 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 BORCS6Q96GS4 357 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 PDE11AQ9HCR9 933 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 DSEQ9UL01 958 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 KMT2EQ8IZD2 1858 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 UBE4BO95155 1302 aa18.47■□□□□ 0.55
SSBP1-207ENST00000468267 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
SSBP1-207ENST00000468267 CYB561D2O14569 222 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 TGFB1I1O43294 461 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 NARSO43776 548 aaKnown RBP18.46■□□□□ 0.55
SSBP1-207ENST00000468267 VNN2O95498 520 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 OR4Q2P0C623 313 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 PFKFB1P16118 471 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 BECN1Q14457 450 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 SCFD1Q8WVM8 642 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 PAGE5Q96GU1 130 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 HSPBP1Q9NZL4 362 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 HPSEQ9Y251 543 aa18.46■□□□□ 0.55
SSBP1-207ENST00000468267 MRPS23Q9Y3D9 190 aaKnown RBP18.46■□□□□ 0.55
SSBP1-207ENST00000468267 ZNF233A6NK53 670 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 KPNA7A9QM74 516 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
SSBP1-207ENST00000468267 PLA2G5P39877 138 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 PNPLA4P41247 253 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 SNRPFP62306 86 aaKnown RBP18.45■□□□□ 0.54
SSBP1-207ENST00000468267 SLC5A9Q2M3M2 681 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 SV2CQ496J9 727 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 METTL23Q86XA0 190 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 ELMOD1Q8N336 334 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 C1orf127Q8N9H9 656 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 CXorf38Q8TB03 319 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 FAM122AQ96E09 287 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 ZNF560Q96MR9 790 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 PGLYRP2Q96PD5 576 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 SCAND2PQ9GZW5 306 aaPredicted RBP18.45■□□□□ 0.54
SSBP1-207ENST00000468267 KIAA1586Q9HCI6 787 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 SLC39A2Q9NP94 309 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 AGAP1Q9UPQ3 857 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 NUMBLQ9Y6R0 609 aa18.45■□□□□ 0.54
SSBP1-207ENST00000468267 FAM237AA0A1B0GTK4 181 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 KLRC4O43908 158 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 ITGB3P05106 788 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 AVPR2P30518 371 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 POLR2BP30876 1174 aaKnown RBP18.44■□□□□ 0.54
SSBP1-207ENST00000468267 VCPP55072 806 aaKnown RBP18.44■□□□□ 0.54
SSBP1-207ENST00000468267 TWF1Q12792 350 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 DUSP4Q13115 394 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 SURF1Q15526 300 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 BMT2Q1RMZ1 405 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 IER5LQ5T953 404 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 WSCD1Q658N2 575 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 PARM1Q6UWI2 310 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 CBWD2Q8IUF1 395 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 NPAS3Q8IXF0 933 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 NELFCDQ8IXH7 590 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 CSGALNACT2Q8N6G5 542 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 OR10T2Q8NGX3 314 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 FGF14Q92915 247 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 FAM84AQ96KN4 292 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 ZNF512Q96ME7 567 aaPredicted RBP18.44■□□□□ 0.54
SSBP1-207ENST00000468267 TMEM209Q96SK2 561 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 RTP3Q9BQQ7 232 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 AGPAT3Q9NRZ7 376 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 CEP72Q9P209 647 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 ITGA11Q9UKX5 1188 aa18.44■□□□□ 0.54
SSBP1-207ENST00000468267 SRFP11831 508 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 PRSS36Q5K4E3 855 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 SCARA3Q6AZY7 606 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 IQCEQ6IPM2 695 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 CENPPQ6IPU0 288 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 MTSS1LQ765P7 747 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 THEM5Q8N1Q8 247 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 LRRC52Q8N7C0 313 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 ST13P5Q8NFI4 369 aaPredicted RBP18.43■□□□□ 0.54
SSBP1-207ENST00000468267 ING5Q8WYH8 240 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 RPP25Q9BUL9 199 aaKnown RBP18.43■□□□□ 0.54
SSBP1-207ENST00000468267 ZCWPW1Q9H0M4 648 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 CRISPLD1Q9H336 500 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 INTS13Q9NVM9 706 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 GDE1Q9NZC3 331 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 CGNQ9P2M7 1197 aaKnown RBP18.43■□□□□ 0.54
SSBP1-207ENST00000468267 WNT16Q9UBV4 365 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 SIX4Q9UIU6 781 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 FBXL21Q9UKT6 434 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 YIPF1Q9Y548 306 aa18.43■□□□□ 0.54
SSBP1-207ENST00000468267 MTMR11A4FU01 709 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 ZNF197O14709 1029 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 CLIC2O15247 247 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 MICAL2O94851 1124 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 MYL1P05976 194 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 CEBPBP17676 345 aa18.42■□□□□ 0.54
SSBP1-207ENST00000468267 SYKP43405 635 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms