RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 KLK14Q9P0G3 267 aa4.73□□□□□ -1.65
CPS1-205ENST00000467353 CEP72Q9P209 647 aa4.73□□□□□ -1.65
CPS1-205ENST00000467353 STIM2Q9P246 746 aa4.73□□□□□ -1.65
CPS1-205ENST00000467353 SEC63Q9UGP8 760 aaKnown RBP4.73□□□□□ -1.65
CPS1-205ENST00000467353 CDY1Q9Y6F8 540 aa4.73□□□□□ -1.65
CPS1-205ENST00000467353 MYH7P12883 1935 aa4.73□□□□□ -1.65
CPS1-205ENST00000467353 SALL3Q9BXA9 1300 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 PTPN13Q12923 2485 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 GREB1Q4ZG55 1949 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 KAT6AQ92794 2004 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 APC2O95996 2303 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 CACNA1EQ15878 2313 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 OTOL1A6NHN0 477 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 CASTOR2A6NHX0 329 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ESPNB1AK53 854 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 PRRG1O14668 218 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 TRDMT1O14717 391 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 CAPN9O14815 690 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 OPHN1O60890 802 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 MAFO75444 373 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 ABLIM3O94929 683 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 CLSTN1O94985 981 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 LRG1P02750 347 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 NTRK1P04629 796 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 MYL4P12829 197 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 FGFR3P22607 806 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SREBF1P36956 1147 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 EIF2S3P41091 472 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 EIF1AXP47813 144 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 GALK1P51570 392 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 EMP3P54852 163 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 GRSF1Q12849 480 aaKnown RBP eCLIP4.72□□□□□ -1.65
CPS1-205ENST00000467353 DMC1Q14565 340 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 IMMTQ16891 758 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 MTERF2Q49AM1 385 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 USP39Q53GS9 565 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 NAIF1Q69YI7 327 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 SLC23A3Q6PIS1 610 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 CD300LGQ6UXG3 332 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 NYAP1Q6ZVC0 841 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ARMCX6Q7L4S7 300 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SYT13Q7L8C5 426 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 TMPRSS7Q7RTY8 843 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 CATIPQ7Z7H3 387 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SYT12Q8IV01 421 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ARID3BQ8IVW6 561 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 SMAP1Q8IYB5 467 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 TCEAL8Q8IYN2 117 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 HDDC3Q8N4P3 179 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ZNF461Q8TAF7 563 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SHKBP1Q8TBC3 707 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 FBF1Q8TES7 1133 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 PRPF31Q8WWY3 499 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 CRYGNQ8WXF5 182 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 BAP1Q92560 729 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 EZH1Q92800 747 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 E2F7Q96AV8 911 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ALKBH8Q96BT7 664 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 CPB2Q96IY4 423 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 FNBP1Q96RU3 617 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ZNF577Q9BSK1 485 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 TPSD1Q9BZJ3 242 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SLC6A16Q9GZN6 736 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 NXF3Q9H4D5 531 aaKnown RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 CNNM2Q9H8M5 875 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 PRDM9Q9NQV7 894 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 DISC1Q9NRI5 854 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 MTRRQ9UBK8 725 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 GIT1Q9Y2X7 761 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 SAMM50Q9Y512 469 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 ZMYM2Q9UBW7 1377 aa4.72□□□□□ -1.65
CPS1-205ENST00000467353 UBR5O95071 2799 aaPredicted RBP4.72□□□□□ -1.65
CPS1-205ENST00000467353 MYO9AB2RTY4 2548 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 FAM149AA5PLN7 773 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 ANTXRLA6NF34 631 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 CAPN8A6NHC0 703 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 B8ZZF3 427 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 I3L4J1 428 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 TNFRSF10BO14763 440 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 ADAMTS3O15072 1205 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 ZBTB24O43167 697 aaPredicted RBP4.71□□□□□ -1.66
CPS1-205ENST00000467353 TSPAN1O60635 241 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 FOSP01100 380 aaPredicted RBP4.71□□□□□ -1.66
CPS1-205ENST00000467353 CFIP05156 583 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 SDSP20132 328 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 ITPKAP23677 461 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 U2AF2P26368 475 aaKnown RBP eCLIP4.71□□□□□ -1.66
CPS1-205ENST00000467353 ELF1P32519 619 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 EPHA5P54756 1037 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 GDF10P55107 478 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 COPS2P61201 443 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 DAB2P98082 770 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 ROR1Q01973 937 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 GFPT1Q06210 699 aaPredicted RBP4.71□□□□□ -1.66
CPS1-205ENST00000467353 DHX9Q08211 1270 aaKnown RBP4.71□□□□□ -1.66
CPS1-205ENST00000467353 LAMTOR4Q0VGL1 99 aa4.71□□□□□ -1.66
CPS1-205ENST00000467353 GRIK3Q13003 919 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms