RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 E7ENX8 843 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 ANXA1P04083 346 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 PPP3CBP16298 524 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 WT1P19544 449 aaPredicted RBP6.19□□□□□ -1.42
ATG3-204ENST00000467275 ABCG1P45844 678 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 POU6F2P78424 691 aaPredicted RBP6.19□□□□□ -1.42
ATG3-204ENST00000467275 TAP2Q03519 686 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 FOXF2Q12947 444 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 UAP1L1Q3KQV9 507 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 PNMA8AQ86V59 439 aaPredicted RBP6.19□□□□□ -1.42
ATG3-204ENST00000467275 SARAFQ96BY9 339 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 MTMR8Q96EF0 704 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 LRIG1Q96JA1 1093 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 NR2E3Q9Y5X4 410 aa6.19□□□□□ -1.42
ATG3-204ENST00000467275 NPTX2P47972 431 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 ATXN1P54253 815 aaKnown RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 NXPH1P58417 271 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 ITIH3Q06033 890 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 SRSF4Q08170 494 aaKnown RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 MTMR1Q13613 665 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 PCBP2Q15366 365 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATG3-204ENST00000467275 TXNRD1Q16881 649 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 FAM153CQ494X1 144 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 KHDC1Q4VXA5 237 aaKnown RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 DMRTA2Q96SC8 542 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 VRK1Q99986 396 aaPredicted RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 CCDC8Q9H0W5 538 aaPredicted RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 KMT5AQ9NQR1 393 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 ST3GAL5Q9UNP4 418 aa6.18□□□□□ -1.42
ATG3-204ENST00000467275 CFAP20Q9Y6A4 193 aaKnown RBP6.18□□□□□ -1.42
ATG3-204ENST00000467275 LINC00473A8K010 186 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 POLRMTO00411 1230 aaKnown RBP6.17□□□□□ -1.42
ATG3-204ENST00000467275 GNAI3P08754 354 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 MALP21145 153 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 SOX10P56693 466 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 GNAI1P63096 354 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 CCDC93Q567U6 631 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 SLC30A10Q6XR72 485 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 PTF1AQ7RTS3 328 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 AMIGO2Q86SJ2 522 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 SH2D3CQ8N5H7 860 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 FBXO41Q8TF61 875 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 HAPLN3Q96S86 360 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 BRD9Q9H8M2 597 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 GNL3LQ9NVN8 582 aaKnown RBP6.17□□□□□ -1.42
ATG3-204ENST00000467275 WNT6Q9Y6F9 365 aa6.17□□□□□ -1.42
ATG3-204ENST00000467275 A0A0B4J269 797 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 E9PLN8 166 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 F5H697 171 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 F2RL2O00254 374 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 ELFN1P0C7U0 828 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 CDK11BP21127 795 aaKnown RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 SMARCA1P28370 1054 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 HNRNPMP52272 730 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATG3-204ENST00000467275 PROK1P58294 105 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 KRT85P78386 507 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 EXOSC10Q01780 885 aaKnown RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 TUBB3Q13509 450 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 TMPRSS9Q7Z410 1059 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 PDSS2Q86YH6 399 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 FAM9AQ8IZU1 332 aaPredicted RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 NSUN6Q8TEA1 469 aaKnown RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 SCAMP4Q969E2 229 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 VKORC1Q9BQB6 163 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 SLC29A3Q9BZD2 475 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 KLC4Q9NSK0 619 aa6.16□□□□□ -1.42
ATG3-204ENST00000467275 SIDT1Q9NXL6 827 aaKnown RBP6.16□□□□□ -1.42
ATG3-204ENST00000467275 KAT6AQ92794 2004 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 ZNF785A8K8V0 405 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 GABRDO14764 452 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 TRIAP1O43715 76 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 KATNA1O75449 491 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 CYP2C19P33261 490 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 SNAPC2Q13487 334 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 FAM50AQ14320 339 aaKnown RBP6.15□□□□□ -1.42
ATG3-204ENST00000467275 SLC4A10Q6U841 1118 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 POC1BQ8TC44 478 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 TPSD1Q9BZJ3 242 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 CFAP97Q9P2B7 532 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 SERPINB13Q9UIV8 391 aa6.15□□□□□ -1.42
ATG3-204ENST00000467275 DNAJC9-AS1A6NH13 148 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 MANSC4A6NHS7 340 aaPredicted RBP6.14□□□□□ -1.43
ATG3-204ENST00000467275 GCOM1H8Y6P7 765 aaPredicted RBP6.14□□□□□ -1.43
ATG3-204ENST00000467275 FZD9O00144 591 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 URI1O94763 535 aaPredicted RBP6.14□□□□□ -1.43
ATG3-204ENST00000467275 TTLL1O95922 423 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 GJB1P08034 283 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 CCND1P24385 295 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 NDUFV1P49821 464 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 ADKP55263 362 aaKnown RBP6.14□□□□□ -1.43
ATG3-204ENST00000467275 PTPN21Q16825 1174 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 RASAL3Q86YV0 1011 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 HASPINQ8TF76 798 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 SLAMF7Q9NQ25 335 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 RLIMQ9NVW2 624 aa6.14□□□□□ -1.43
ATG3-204ENST00000467275 SPATA31A3Q5VYP0 1347 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms