RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 ZNF785A8K8V0 405 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 TOR1BO14657 336 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 MATN4O95460 622 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 BMP5P22003 454 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 LPOP22079 712 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 GATA3P23771 443 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 PHKA1P46020 1223 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 ANXA11P50995 505 aaKnown RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 EPHB1P54762 984 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 RPS7P62081 194 aaKnown RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 MC2RQ01718 297 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 DYRK1AQ13627 763 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 KIF22Q14807 665 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 SF3B3Q15393 1217 aaKnown RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 CD300EQ496F6 205 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 IFIT1BQ5T764 474 aaKnown RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 GRAMD1CQ8IYS0 662 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 SH2D3CQ8N5H7 860 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 JPH3Q8WXH2 748 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 TRIB1Q96RU8 372 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 MAP3K14Q99558 947 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 SMOQ99835 787 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 AIFM2Q9BRQ8 373 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 SYNPO2LQ9H987 977 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 GPR35Q9HC97 309 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 INTS13Q9NVM9 706 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 KCTD5Q9NXV2 234 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 PNMA8BQ9ULN7 279 aaPredicted RBP5.03□□□□□ -1.6
VPS13D-203ENST00000466732 DMTF1Q9Y222 760 aa5.03□□□□□ -1.6
VPS13D-203ENST00000466732 OFD1O75665 1012 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 RARBP10826 455 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 ZNF135P52742 658 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 HABP2Q14520 560 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 ZNF267Q14586 743 aaPredicted RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 TMPRSS9Q7Z410 1059 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 PPP1R3BQ86XI6 285 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 ADGRG5Q8IZF4 528 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 POC1BQ8TC44 478 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 SLC9A6Q92581 669 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 TNPO1Q92973 898 aaKnown RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 MRPS18AQ9NVS2 196 aaKnown RBP5.02□□□□□ -1.61
VPS13D-203ENST00000466732 ZNHIT2Q9UHR6 403 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 ZDHHC8Q9ULC8 765 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 AGAP1Q9UPQ3 857 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 PCDHA1Q9Y5I3 950 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 NR2E3Q9Y5X4 410 aa5.02□□□□□ -1.61
VPS13D-203ENST00000466732 E7ENX8 843 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 H3BUI4 141 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 POLRMTO00411 1230 aaKnown RBP5.01□□□□□ -1.61
VPS13D-203ENST00000466732 KIAA0355O15063 1070 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 AP1G1O43747 822 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 NUDT3O95989 172 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CHEK2O96017 543 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 AHSGP02765 367 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ALDH2P05091 517 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 SRGNP10124 158 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CXCR5P32302 372 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 TAP2Q03519 686 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 PLS1Q14651 629 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 PLEKHG6Q3KR16 790 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 PREPLQ4J6C6 727 aaPredicted RBP5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CCDC157Q569K6 752 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ODR4Q5SWX8 454 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 SLC30A10Q6XR72 485 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 TPH2Q8IWU9 490 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 SLC30A5Q8TAD4 765 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 DIS3LQ8TF46 1054 aaKnown RBP5.01□□□□□ -1.61
VPS13D-203ENST00000466732 SNX19Q92543 992 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 C1GALT1C1Q96EU7 318 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 AIFM3Q96NN9 605 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CAMKK2Q96RR4 588 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CGRRF1Q99675 332 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 CDH19Q9H159 772 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ALG13Q9NP73 1137 aaKnown RBP5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ZIM2Q9NZV7 527 aa5.01□□□□□ -1.61
VPS13D-203ENST00000466732 THRAP3Q9Y2W1 955 aaKnown RBP5.01□□□□□ -1.61
VPS13D-203ENST00000466732 ZAR1LA6NP61 321 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 PEX1O43933 1283 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 RFPL1O75677 317 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 FOLR3P41439 243 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 CLK3P49761 638 aaKnown RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 NANOS3P60323 173 aaKnown RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 MRPS35P82673 323 aaKnown RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 HLXQ14774 488 aaPredicted RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 ZNF169Q14929 603 aaPredicted RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 ERCC6LQ2NKX8 1250 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 PRR16Q569H4 304 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 VWA1Q6PCB0 445 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 MICALCLQ6ZW33 695 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 USP37Q86T82 979 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 DNAJC10Q8IXB1 793 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 RAVER1Q8IY67 606 aaKnown RBP5□□□□□ -1.61
VPS13D-203ENST00000466732 SIMC1Q8NDZ2 872 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 FBXO41Q8TF61 875 aa5□□□□□ -1.61
VPS13D-203ENST00000466732 LPIN2Q92539 896 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms