RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 SMOQ99835 787 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 KLC4Q9NSK0 619 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 IPPQ9Y573 584 aa5.23□□□□□ -1.57
CHMP2B-202ENST00000466696 WDR27A2RRH5 827 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 KLHL33A6NCF5 533 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 WIPF3A6NGB9 483 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 MANSC4A6NHS7 340 aaPredicted RBP5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 LINC00473A8K010 186 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 HTRA2O43464 458 aaPredicted RBP5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 PRKCGP05129 697 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 NPTX2P47972 431 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 ZNF81P51508 661 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 MC2RQ01718 297 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 TLE1Q04724 770 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 FCRLBQ6BAA4 426 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 TAPT1Q6NXT6 567 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 C1QL2Q7Z5L3 287 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 CBARPQ8N350 705 aaPredicted RBP5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 TRIB1Q96RU8 372 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 C1QTNF7Q9BXJ2 289 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 FAM126AQ9BYI3 521 aaPredicted RBP5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 SLC45A2Q9UMX9 530 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 LIMCH1Q9UPQ0 1083 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 SPATA31A3Q5VYP0 1347 aa5.22□□□□□ -1.57
CHMP2B-202ENST00000466696 URI1O94763 535 aaPredicted RBP5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 ITPKBP27987 946 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 IARSP41252 1262 aaKnown RBP5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 EXOSC10Q01780 885 aaKnown RBP5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 IL10RAQ13651 578 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 AMIGO2Q86SJ2 522 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 PDSS2Q86YH6 399 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 DPF1Q92782 380 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 FAXDC2Q96IV6 333 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 LRIG1Q96JA1 1093 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 ALG8Q9BVK2 526 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 MRFAP1Q9Y605 127 aa5.21□□□□□ -1.58
CHMP2B-202ENST00000466696 A0A0B4J269 797 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 CCDC154A6NI56 674 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 TRIAP1O43715 76 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 TTLL1O95922 423 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 CELA2AP08217 269 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 EDNRBP24530 442 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 HNRNPMP52272 730 aaKnown RBP eCLIP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 TUBB3Q13509 450 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 C3orf36Q3SXR2 165 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 DDX42Q86XP3 938 aaKnown RBP eCLIP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 FAM9AQ8IZU1 332 aaPredicted RBP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 POC1BQ8TC44 478 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 SCAMP4Q969E2 229 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 PBKQ96KB5 322 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 GNL3LQ9NVN8 582 aaKnown RBP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 SIDT1Q9NXL6 827 aaKnown RBP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 ST3GAL5Q9UNP4 418 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHB1Q9Y5F3 818 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 NR2E3Q9Y5X4 410 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 CFAP20Q9Y6A4 193 aaKnown RBP5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 AOX1Q06278 1338 aa5.2□□□□□ -1.58
CHMP2B-202ENST00000466696 VWC2LB2RUY7 222 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 F5H697 171 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 POLRMTO00411 1230 aaKnown RBP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 MT-CO1P00395 513 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 CYP2C19P33261 490 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 KRT85P78386 507 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 KIF23Q02241 960 aaPredicted RBP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 EZH2Q15910 746 aaKnown RBP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 SRSF7Q16629 238 aaKnown RBP eCLIP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 SYDE2Q5VT97 1194 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 SUMO4Q6EEV6 95 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 TTC7BQ86TV6 843 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 RASAL3Q86YV0 1011 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 DDB2Q92466 427 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 COA7Q96BR5 231 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 ZNF778Q96MU6 729 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 DMRTA2Q96SC8 542 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 OSBPL9Q96SU4 736 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 RLIMQ9NVW2 624 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 FLRT1Q9NZU1 646 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 ZNF70Q9UC06 446 aaPredicted RBP5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 ADAM21Q9UKJ8 722 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 PADI4Q9UM07 663 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 ADGRA2Q96PE1 1338 aa5.19□□□□□ -1.58
CHMP2B-202ENST00000466696 E9PLN8 166 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PCDHGA12O60330 932 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 SOAT2O75908 522 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 CHEK2O96017 543 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 GNAI3P08754 354 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 ITGB6P18564 788 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 NDUFV1P49821 464 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 GNAI1P63096 354 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 SLC10A2Q12908 348 aaPredicted RBP5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 LLGL1Q15334 1064 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 CCDC93Q567U6 631 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 PLAC9Q5JTB6 97 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 SEMA6DQ8NFY4 1073 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 NSUN6Q8TEA1 469 aaKnown RBP5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 KAT5Q92993 513 aa5.18□□□□□ -1.58
CHMP2B-202ENST00000466696 VKORC1Q9BQB6 163 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms