RNA–Protein interactions for RNA: ENST00000466416.1

ABCF3-205, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-205	ENST00000466416	GALNT17	Q6IS24	598 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	RNF19B	Q6ZMZ0	732 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	GAREM2	Q75VX8	874 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	FAM177A1	Q8N128	213 aa	Predicted RBP	10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	HDDC3	Q8N4P3	179 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	BEST2	Q8NFU1	509 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	CCDC26	Q8TAB7	109 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	HNRNPLL	Q8WVV9	542 aa	Known RBP	10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	PIGK	Q92643	395 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	SUSD3	Q96L08	255 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	CCDC43	Q96MW1	224 aa	Known RBP	10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	FAM83C	Q9BQN1	747 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	SLC26A6	Q9BXS9	759 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	TASP1	Q9H6P5	420 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	GOLGA2P5	Q9HBQ8	144 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	ZMYM5	Q9UJ78	669 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	NUB1	Q9Y5A7	615 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	NUP205	Q92621	2012 aa		10.11	□□□□□ -0.79
ABCF3-205	ENST00000466416	EML5	Q05BV3	1969 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	TK2	O00142	265 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	BAG4	O95429	457 aa	Known RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	XRCC6	P12956	609 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	ENG	P17813	658 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	MARCKS	P29966	332 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	MAPK8	P45983	427 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	RARRES1	P49788	294 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	SOX4	Q06945	474 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	KRT32	Q14532	448 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	INF2	Q27J81	1249 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	XKR4	Q5GH76	650 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	ALKAL1	Q6UXT8	129 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	KRT25	Q7Z3Z0	450 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	SYT12	Q8IV01	421 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	SLFN12	Q8IYM2	578 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	DAGLB	Q8NCG7	672 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	TSTD1	Q8NFU3	115 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	RPLP0P6	Q8NHW5	317 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	HAS1	Q92839	578 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	LRIG1	Q96JA1	1093 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	NAP1L4	Q99733	375 aa	Known RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	P2RY13	Q9BPV8	354 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	HSD17B14	Q9BPX1	270 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	ESYT1	Q9BSJ8	1104 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	DNAJC25	Q9H1X3	360 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	ANO2	Q9NQ90	1003 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	INVS	Q9Y283	1065 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	NID2	Q14112	1375 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	LOC400499	M0QZD8	3231 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	ATG2B	Q96BY7	2078 aa		10.1	□□□□□ -0.79
ABCF3-205	ENST00000466416	URB1	O60287	2271 aa	Known RBP	10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	TNFRSF10B	O14763	440 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	PRAMEF12	O95522	483 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	GABRR2	P28476	465 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	YARS	P54577	528 aa	Known RBP	10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	DUSP4	Q13115	394 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	SPDYC	Q5MJ68	293 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	EEF1DP3	Q658K8	133 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	SLC23A3	Q6PIS1	610 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	ITIH5	Q86UX2	942 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	MCPH1	Q8NEM0	835 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	ADAMTS14	Q8WXS8	1223 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	DDX12P	Q92771	950 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	PSMG2	Q969U7	264 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	EIF2AK1	Q9BQI3	630 aa	Known RBP	10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	HPS4	Q9NQG7	708 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	FREM2	Q5SZK8	3169 aa		10.09	□□□□□ -0.79
ABCF3-205	ENST00000466416	APC2	O95996	2303 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	OTOL1	A6NHN0	477 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	USO1	O60763	962 aa	Known RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	OPHN1	O60890	802 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	OAZ2	O95190	189 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	BCKDHB	P21953	392 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	HOXD12	P35452	270 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	ATXN3	P54252	364 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	GPR17	Q13304	367 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	ADCK5	Q3MIX3	580 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	LPCAT2	Q7L5N7	544 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	NEK8	Q86SG6	692 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	RASSF3	Q86WH2	238 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	TRIM22	Q8IYM9	498 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	CHFR	Q96EP1	664 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	CNOT6L	Q96LI5	555 aa	Known RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	TBC1D32	Q96NH3	1257 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	UBL7	Q96S82	380 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	CCDC94	Q9BW85	323 aa	Predicted RBP	10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	CCDC113	Q9H0I3	377 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	EBF3	Q9H4W6	596 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	GPRC5C	Q9NQ84	441 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	HSFX1	Q9UBD0	423 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	TBX20	Q9UMR3	447 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	PCDHB8	Q9UN66	801 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	RAX	Q9Y2V3	346 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	GON4L	Q3T8J9	2241 aa		10.08	□□□□□ -0.8
ABCF3-205	ENST00000466416	THADA	Q6YHU6	1953 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms