RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 EBF3Q9H4W6 596 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 SCUBE2Q9NQ36 999 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 ASXL3Q9C0F0 2248 aa16.57■□□□□ 0.24
NCSTN-210ENST00000465223 ATXN2Q99700 1313 aaKnown RBP16.56■□□□□ 0.24
NCSTN-210ENST00000465223 A0A087WWV3 80 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 UPK3BL1B0FP48 263 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 UPK3BL2E5RIL1 263 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 PODXLO00592 558 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 DGAT1O75907 488 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 OR4Q2P0C623 313 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 PLA2G2AP14555 144 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 LIG1P18858 919 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 RCAN1P53805 252 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 CYP4F8P98187 520 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
NCSTN-210ENST00000465223 PRPF4BQ13523 1007 aaKnown RBP16.56■□□□□ 0.24
NCSTN-210ENST00000465223 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
NCSTN-210ENST00000465223 ZNF280DQ6N043 979 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 PNPLA1Q8N8W4 532 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 FAM83CQ9BQN1 747 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 ADPGKQ9BRR6 497 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 SLC26A6Q9BXS9 759 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 C22orf23Q9BZE7 217 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 KCNMB3Q9NPA1 279 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
NCSTN-210ENST00000465223 CCDC196A0A1B0GTZ2 297 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 SMIM28A0A1B0GU29 152 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 SLITRK3O94933 977 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 GABRR2P28476 465 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 PSMD2Q13200 908 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 FAM187BQ17R55 369 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 INF2Q27J81 1249 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 ADCK5Q3MIX3 580 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 CCNI2Q6ZMN8 369 aaPredicted RBP16.55■□□□□ 0.24
NCSTN-210ENST00000465223 C11orf74Q86VG3 221 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 TSTD1Q8NFU3 115 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 HAS1Q92839 578 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 FAM20AQ96MK3 541 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 GTPBP2Q9BX10 602 aaKnown RBP16.55■□□□□ 0.24
NCSTN-210ENST00000465223 THG1LQ9NWX6 298 aaKnown RBP16.55■□□□□ 0.24
NCSTN-210ENST00000465223 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 NAV2Q8IVL1 2488 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 PTPRBP23467 1997 aa16.55■□□□□ 0.24
NCSTN-210ENST00000465223 ACACAQ13085 2346 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 M0R2N6 131 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 ARSAP15289 507 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 DRD1P21728 446 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 EPHB3P54753 998 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 DUSP4Q13115 394 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 NTRK3Q16288 839 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 CDCA2Q69YH5 1023 aaPredicted RBP16.54■□□□□ 0.24
NCSTN-210ENST00000465223 ANO7Q6IWH7 933 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 DNAJB7Q7Z6W7 309 aaPredicted RBP16.54■□□□□ 0.24
NCSTN-210ENST00000465223 ZBTB8OSQ8IWT0 167 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 HDDC3Q8N4P3 179 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 DDX12PQ92771 950 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 CAMK1GQ96NX5 476 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 MAFFQ9ULX9 164 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 NUB1Q9Y5A7 615 aa16.54■□□□□ 0.24
NCSTN-210ENST00000465223 APC2O95996 2303 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 ZNF638Q14966 1978 aaKnown RBP16.53■□□□□ 0.24
NCSTN-210ENST00000465223 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 ANTXRLA6NF34 631 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 USO1O60763 962 aaKnown RBP16.53■□□□□ 0.24
NCSTN-210ENST00000465223 SOAT2O75908 522 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 PTGER3P43115 390 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 PLD1Q13393 1074 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 SLC23A3Q6PIS1 610 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 TMEFF1Q8IYR6 380 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 BLIDQ8IZY5 108 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 FRMD1Q8N878 549 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 OR2I1PQ8NGU4 316 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 RLN3Q8WXF3 142 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 ADAMTS14Q8WXS8 1223 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 SLC39A7Q92504 469 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 ACDQ96AP0 544 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 RNF26Q9BY78 433 aaPredicted RBP16.53■□□□□ 0.24
NCSTN-210ENST00000465223 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 SLC27A5Q9Y2P5 690 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 URB1O60287 2271 aaKnown RBP16.53■□□□□ 0.24
NCSTN-210ENST00000465223 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
NCSTN-210ENST00000465223 MCM4P33991 863 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 RARRES1P49788 294 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 DCAF4L1Q3SXM0 396 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 FBXO43Q4G163 708 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 ARHGAP15Q53QZ3 475 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 RASSF3Q86WH2 238 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 SYT12Q8IV01 421 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 TTC9BQ8N6N2 239 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 CEP120Q8N960 986 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 MDGA1Q8NFP4 955 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 BSNDQ8WZ55 320 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 SUSD3Q96L08 255 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.24
NCSTN-210ENST00000465223 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 ANKEF1Q9NU02 776 aa16.52■□□□□ 0.24
NCSTN-210ENST00000465223 CCL26Q9Y258 94 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms