RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 CLNKQ7Z7G1 428 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 Q8NA96 180 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 PLBD2Q8NHP8 589 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 RNF31Q96EP0 1072 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 SMOQ99835 787 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 MLST8Q9BVC4 326 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 RSAD1Q9HA92 442 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 SLAMF7Q9NQ25 335 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 HS3ST3A1Q9Y663 406 aa7.52□□□□□ -1.21
PTCD3-205ENST00000464541 PIPSLA2A3N6 862 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 SPDEFO95238 335 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 VAV2P52735 878 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 ZNF135P52742 658 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-205ENST00000464541 PSMC1P62191 440 aaKnown RBP7.51□□□□□ -1.21
PTCD3-205ENST00000464541 HABP2Q14520 560 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-205ENST00000464541 KHDC1LQ5JSQ8 128 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
PTCD3-205ENST00000464541 KIAA0319LQ8IZA0 1049 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 SERHL2Q9H4I8 314 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 CHPF2Q9P2E5 772 aa7.51□□□□□ -1.21
PTCD3-205ENST00000464541 PRAMEF33A0A0G2JMD5 474 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 TMEM191CA6NGB0 347 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 CAPN8A6NHC0 703 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 VSTM5A8MXK1 200 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 E9PLN8 166 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 MARCH6O60337 910 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 LPXNO60711 386 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 PRAMEF10O60809 474 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 SOAT2O75908 522 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 AHSGP02765 367 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 HRGP04196 525 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 ATF3P18847 181 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 ANXA11P50995 505 aaKnown RBP7.5□□□□□ -1.21
PTCD3-205ENST00000464541 NPNTQ6UXI9 565 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 WDR75Q8IWA0 830 aaKnown RBP7.5□□□□□ -1.21
PTCD3-205ENST00000464541 VKORC1Q9BQB6 163 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 PCGF6Q9BYE7 350 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 B3GNT5Q9BYG0 378 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
PTCD3-205ENST00000464541 PIH1D1Q9NWS0 290 aaKnown RBP7.5□□□□□ -1.21
PTCD3-205ENST00000464541 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 SRRDQ9UH36 339 aa7.5□□□□□ -1.21
PTCD3-205ENST00000464541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.5□□□□□ -1.21
PTCD3-205ENST00000464541 PHGDHO43175 533 aaKnown RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 EGR2P11161 476 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 SOX8P57073 446 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 RPS7P62081 194 aaKnown RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 TP53BP2Q13625 1128 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 TAPT1Q6NXT6 567 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 CHST15Q7LFX5 561 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 PPP1R32Q7Z5V6 425 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 NEU4Q8WWR8 484 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 LARP4BQ92615 738 aaKnown RBP7.49□□□□□ -1.21
PTCD3-205ENST00000464541 NACC2Q96BF6 587 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 C8orf48Q96LL4 319 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 COQ10AQ96MF6 247 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 TRIB1Q96RU8 372 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 ARMT1Q9H993 441 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 TBCCD1Q9NVR7 557 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 OBP2AQ9NY56 170 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 L1RE1Q9UN81 338 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 MED16Q9Y2X0 877 aa7.49□□□□□ -1.21
PTCD3-205ENST00000464541 A0A1W2PPL8 197 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 UNC119BA6NIH7 251 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 POLRMTO00411 1230 aaKnown RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 FSHBP01225 129 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 THP07101 528 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 TGM1P22735 817 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 ZEB1P37275 1124 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 AVPR1BP47901 424 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 CACNB3P54284 484 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 DYRK1AQ13627 763 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 HLXQ14774 488 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 MAEAQ7L5Y9 396 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 TMPRSS9Q7Z410 1059 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 C14orf80Q86SX3 495 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 USP37Q86T82 979 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 SLC16A11Q8NCK7 471 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 POC1BQ8TC44 478 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 KBTBD7Q8WVZ9 684 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 MRGPRX1Q96LB2 322 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 WDR11Q9BZH6 1224 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 UNKLQ9H9P5 680 aaKnown RBP7.48□□□□□ -1.21
PTCD3-205ENST00000464541 ETAA1Q9NY74 926 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 ANKFY1Q9P2R3 1169 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 PCDHA6Q9UN73 950 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 SPATA31A3Q5VYP0 1347 aa7.48□□□□□ -1.21
PTCD3-205ENST00000464541 FRS3O43559 492 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 SUN1O94901 812 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 ZBED1O96006 694 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 PHKA1P46020 1223 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 SCAPQ12770 1279 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 CRB2Q5IJ48 1285 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 FAM160B1Q5W0V3 765 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 LCORLQ8N3X6 602 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 PCED1AQ9H1Q7 454 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 INTS13Q9NVM9 706 aa7.47□□□□□ -1.21
PTCD3-205ENST00000464541 CPA4Q9UI42 421 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms