RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 ASB16Q96NS5 453 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 CLIC6Q96NY7 704 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 BACH2Q9BYV9 841 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 PLA2G2FQ9BZM2 168 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 TRPV4Q9HBA0 871 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 OLFML3Q9NRN5 406 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 DSEQ9UL01 958 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 EXOC7Q9UPT5 735 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 ASB3Q9Y575 518 aa15.56■□□□□ 0.08
SNRNP40-203ENST00000463988 TISP43B9A030 160 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 SPTLC1O15269 473 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 IL18RAPO95256 599 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 GLULP15104 373 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 ADSSP30520 456 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 EPHB3P54753 998 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 DUSP4Q13115 394 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 ALCAMQ13740 583 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 L1TD1Q5T7N2 865 aaKnown RBP15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 ARMCX5Q6P1M9 558 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 CRELD2Q6UXH1 353 aaPredicted RBP15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 HS6ST3Q8IZP7 471 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 POMGNT1Q8WZA1 660 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 ACCSQ96QU6 501 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 LRRC3Q9BY71 257 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 BCO2Q9BYV7 579 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 MRPL44Q9H9J2 332 aaKnown RBP15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 LTB4R2Q9NPC1 389 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 TRPV5Q9NQA5 729 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 PCDHB13Q9Y5F0 798 aa15.55■□□□□ 0.08
SNRNP40-203ENST00000463988 FRMD3A2A2Y4 597 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 MTMR11A4FU01 709 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 FAM170BA6NMN3 283 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 K7ELQ4 463 aaPredicted RBP15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 STX6O43752 255 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 OR4Q2P0C623 313 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 MYL4P12829 197 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 ALDH1A3P47895 512 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 TAF6P49848 677 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 CEBPZQ03701 1054 aaKnown RBP15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 ZNF852Q6ZMS4 543 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 DEPDC1BQ8WUY9 529 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 IRF7Q92985 503 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 E2F7Q96AV8 911 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 CLDN23Q96B33 292 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 BORCS6Q96GS4 357 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 ZSWIM3Q96MP5 696 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 PGLYRP2Q96PD5 576 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 TRMT61BQ9BVS5 477 aaKnown RBP15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 DNAJC25Q9H1X3 360 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 CRISPLD1Q9H336 500 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 DPP3Q9NY33 737 aa15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 MRPS17Q9Y2R5 130 aaKnown RBP15.54■□□□□ 0.08
SNRNP40-203ENST00000463988 NRG2O14511 850 aaPredicted RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 NCAM2O15394 837 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 FGF19O95750 216 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 LDHAP00338 332 aaKnown RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 SP9P0CG40 484 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 PSMC3P17980 439 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 GARTP22102 1010 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 STAT6P42226 847 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 RPS9P46781 194 aaKnown RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 SMARCB1Q12824 385 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 UBXN2BQ14CS0 331 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ZNF528Q3MIS6 628 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ZC3H14Q6PJT7 736 aaKnown RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 TPRG1Q6ZUI0 275 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 METTL23Q86XA0 190 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 TMC8Q8IU68 726 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ATAD1Q8NBU5 361 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 SHKBP1Q8TBC3 707 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ZSCAN18Q8TBC5 510 aaPredicted RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ZCWPW1Q9H0M4 648 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 BRD9Q9H8M2 597 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 MTF2Q9Y483 593 aaPredicted RBP15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 MIA3Q5JRA6 1907 aa15.53■□□□□ 0.08
SNRNP40-203ENST00000463988 ANK1P16157 1881 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 SCN1AP35498 2009 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 MAN2B1O00754 1011 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 CYB561D2O14569 222 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 LRRN2O75325 713 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 GCNT3O95395 438 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 PNPLA4P41247 253 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 TUFMP49411 452 aaKnown RBP15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 KCNA1Q09470 495 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 TEAD2Q15562 447 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 VITQ6UXI7 678 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 ITIH5Q86UX2 942 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 MFSD6LQ8IWD5 586 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 EFCAB13Q8IY85 973 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 MAML2Q8IZL2 1156 aaPredicted RBP15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 ADSSL1Q8N142 457 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 THEM5Q8N1Q8 247 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 OR10T2Q8NGX3 314 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 C2orf15Q8WU43 125 aaKnown RBP15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 PSMG2Q969U7 264 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 IKZF4Q9H2S9 585 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 HEBP1Q9NRV9 189 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms