RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ANKRD62A6NC57 917 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 ARL5CA6NH57 179 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 PIRO00625 290 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 CLEC16AQ2KHT3 1053 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 TTC39CQ8N584 583 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 RSAD1Q9HA92 442 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 SNX9Q9Y5X1 595 aa20.29■□□□□ 0.84
CCDC78-206ENST00000463539 A0A0A6YYK5 440 aaPredicted RBP20.28■□□□□ 0.84
CCDC78-206ENST00000463539 SLC39A5Q6ZMH5 540 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 TRIM72Q6ZMU5 477 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 ANKRD33Q7Z3H0 272 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 GSTCDQ8NEC7 633 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 UBN1Q9NPG3 1134 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 RGS18Q9NS28 235 aa20.28■□□□□ 0.84
CCDC78-206ENST00000463539 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.28■□□□□ 0.84
CCDC78-206ENST00000463539 CILPO75339 1184 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 URI1O94763 535 aaPredicted RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 THP07101 528 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 LRPAP1P30533 357 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 INCA1Q0VD86 236 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 IFI16Q16666 785 aaKnown RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 ZNF606Q8WXB4 792 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 FTHL17Q9BXU8 183 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 THAP2Q9H0W7 228 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 NCANO14594 1321 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 PAEPP09466 180 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 NOP2P46087 812 aaKnown RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 CTCFP49711 727 aaPredicted RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 TAF6P49848 677 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 SCNN1GP51170 649 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 AFF1P51825 1210 aaKnown RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 ECHDC2Q86YB7 292 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 RFFLQ8WZ73 363 aa20.27■□□□□ 0.84
CCDC78-206ENST00000463539 BARX2Q9UMQ3 279 aaPredicted RBP20.27■□□□□ 0.84
CCDC78-206ENST00000463539 DCDC2CA8MYV0 355 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 NBNO60934 754 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 CYP1A1P04798 512 aaPredicted RBP20.26■□□□□ 0.83
CCDC78-206ENST00000463539 UNGP13051 313 aaPredicted RBP20.26■□□□□ 0.83
CCDC78-206ENST00000463539 BRD2P25440 801 aaKnown RBP20.26■□□□□ 0.83
CCDC78-206ENST00000463539 RAD23BP54727 409 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 SV2CQ496J9 727 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 ACAD10Q6JQN1 1059 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 SLC24A5Q71RS6 500 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 PASD1Q8IV76 773 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 WHAMMQ8TF30 809 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 HMGXB4Q9UGU5 601 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 PCDHGC5Q9Y5F6 944 aa20.26■□□□□ 0.83
CCDC78-206ENST00000463539 KPNA7A9QM74 516 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 COL6A1P12109 1028 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 CD19P15391 556 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 NSFP46459 744 aaKnown RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 GJA8P48165 433 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TRIM60Q495X7 471 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 NAA35Q5VZE5 725 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ZNF598Q86UK7 904 aaKnown RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 SLC4A11Q8NBS3 891 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 DIS3LQ8TF46 1054 aaKnown RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 LINC01599Q8WXQ3 324 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ARHGEF26Q96DR7 871 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 CYFIP2Q96F07 1278 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TMEM176AQ96HP8 235 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TOX2Q96NM4 488 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TWNKQ96RR1 684 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ELOVL4Q9GZR5 314 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TSPYL2Q9H2G4 693 aaPredicted RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 JRKLQ9Y4A0 524 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 C9IYK1 514 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 RIOK3O14730 519 aaKnown RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 CFHP08603 1231 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 NDST1P52848 882 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 GPC5P78333 572 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 CENPCQ03188 943 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ORC1Q13415 861 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 C1orf53Q5VUE5 145 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 RTN4RL1Q86UN2 441 aaPredicted RBP20.25■□□□□ 0.83
CCDC78-206ENST00000463539 CPA5Q8WXQ8 436 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ZSWIM1Q9BR11 485 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 HIPK3Q9H422 1215 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 L2HGDHQ9H9P8 463 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 MIOSQ9NXC5 875 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
CCDC78-206ENST00000463539 ENC1O14682 589 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 SPTLC1O15269 473 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 MED7O43513 233 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 PALMO75781 387 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 LSM8O95777 96 aaKnown RBP20.24■□□□□ 0.83
CCDC78-206ENST00000463539 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
CCDC78-206ENST00000463539 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
CCDC78-206ENST00000463539 SSTR3P32745 418 aaPredicted RBP20.24■□□□□ 0.83
CCDC78-206ENST00000463539 NOMO3P69849 1222 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 TLE2Q04725 743 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 PPP1R2P3Q6NXS1 205 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 RHOT2Q8IXI1 618 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 ANKLE1Q8NAG6 615 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 SLC35G2Q8TBE7 412 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 MRPL45Q9BRJ2 306 aaKnown RBP20.24■□□□□ 0.83
CCDC78-206ENST00000463539 NT5C1AQ9BXI3 368 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 INPP5FQ9Y2H2 1132 aa20.24■□□□□ 0.83
CCDC78-206ENST00000463539 EOMESO95936 686 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms