RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 AP3B1O00203 1094 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 SLC26A2P50443 739 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 GALCP54803 685 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ORC1Q13415 861 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 MFSD10Q14728 455 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 NCAPHQ15003 741 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 ELAC2Q9BQ52 826 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 TRIM55Q9BYV6 548 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 AIPL1Q9NZN9 384 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 SLC30A1Q9Y6M5 507 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 TLR2O60603 784 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 SLC11A2P49281 568 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ADCK2Q7Z695 626 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ATP11CQ8NB49 1132 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 TRIM15Q9C019 465 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 SYNDIG1LA6NDD5 238 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 TYK2P29597 1187 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ERVK-24P63145 666 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 GRIN1Q05586 938 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 MFN1Q8IWA4 741 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 L3MBTL1Q9Y468 752 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 A0A087WZ62 844 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 MAGOHP61326 146 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 EPC2Q52LR7 807 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 KRT82Q9NSB4 513 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 ARHGEF28Q8N1W1 1705 aaKnown RBP13.45□□□□□ -0.26
NUP58-206ENST00000463407 ALDH2P05091 517 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 VGLL4Q14135 290 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 ADGRF2Q8IZF7 708 aa13.45□□□□□ -0.26
NUP58-206ENST00000463407 RSPH10B2B2RC85 870 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 RSPH10BP0C881 870 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 PTGISQ16647 500 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 TMC7Q7Z402 723 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 MS4A14Q96JA4 679 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 HIST1H2AHQ96KK5 128 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 HIST1H2AJQ99878 128 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 H2AFJQ9BTM1 129 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 FAM205AQ6ZU69 1335 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 CASTOR2A6NHX0 329 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 PNMA6AP0CW24 399 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 EPHB3P54753 998 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ZNF177Q13360 481 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 DDIASQ8IXT1 998 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 MKNK1Q9BUB5 465 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 TRIM45Q9H8W5 580 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 MYPNQ86TC9 1320 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 PRR23AA6NEV1 266 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ZNF185O15231 689 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 P4HA2O15460 535 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 NDUFS3O75489 264 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 DCTN3O75935 186 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ALDH5A1P51649 535 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 FKBP1AP62942 108 aaKnown RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 GRB10Q13322 594 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 MOXD1Q6UVY6 613 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ATL2Q8NHH9 583 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 NPTX2P47972 431 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 VCPP55072 806 aaKnown RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 PHEXP78562 749 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 CUL2Q13617 745 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 SLC30A10Q6XR72 485 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 ANKS3Q6ZW76 656 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 CINPQ9BW66 212 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 PPARGC1AQ9UBK2 798 aaKnown RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 AMACRQ9UHK6 382 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 AMHP03971 560 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 DACT3Q96B18 629 aaPredicted RBP13.44□□□□□ -0.26
NUP58-206ENST00000463407 WDCPQ9H6R7 721 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 INTUQ9ULD6 942 aa13.44□□□□□ -0.26
NUP58-206ENST00000463407 RALBP11234 206 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ARHGDIAP52565 204 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ACVR2BQ13705 512 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 HIF1AQ16665 826 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ACOT1Q86TX2 421 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 DSEQ9UL01 958 aa13.43□□□□□ -0.26
NUP58-206ENST00000463407 VWDEQ8N2E2 1590 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms