RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CKAP2Q8WWK9 683 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 HIC2Q96JB3 615 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 CATSPER2Q96P56 530 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 MTRQ99707 1265 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 TBC1D22BQ9NU19 505 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 TBCCD1Q9NVR7 557 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PKD2L1Q9P0L9 805 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PARP2Q9UGN5 583 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 MARCH6O60337 910 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PLEKP08567 350 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PIM1P11309 404 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PMS2P54278 862 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 LRRC41Q15345 812 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 GNASQ5JWF2 1037 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 TTC38Q5R3I4 469 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 RASIP1Q5U651 963 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 NME8Q8N427 588 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 PPTC7Q8NI37 304 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 LRRC8CQ8TDW0 803 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 BAP1Q92560 729 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 NMRK1Q9NWW6 199 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 GDAQ9Y2T3 454 aa12.18□□□□□ -0.46
TRAPPC3-205ENST00000462715 SMIM31A0A1B0GVY4 71 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 TBX3O15119 743 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 MSH4O15457 936 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 PFDN1O60925 122 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 ATP9AO75110 1047 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 FARP2O94887 1054 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SERPINB4P48594 390 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 YARSP54577 528 aaKnown RBP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 MPP3Q13368 585 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 KLHDC9Q8NEP7 349 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLC35B4Q969S0 331 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 FAM20AQ96MK3 541 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 RUNDC3BQ96NL0 473 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 RIT2Q99578 217 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 TSEN34Q9BSV6 310 aaKnown RBP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 LNPEPQ9UIQ6 1025 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZMYND8Q9ULU4 1186 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 A6NJR5 290 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 DAPK3O43293 454 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLC37A4O43826 429 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 KPNA6O60684 536 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 DCTN3O75935 186 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF24P17028 368 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 MCM7P33993 719 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 AP1B1Q10567 949 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 RCN2Q14257 317 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 LIN52Q52LA3 116 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 INTS8Q75QN2 995 aaKnown RBP12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLFN12Q8IYM2 578 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZCWPW1Q9H0M4 648 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 EPB41L4BQ9H329 900 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLC9A2Q9UBY0 812 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 SH3GLB1Q9Y371 365 aa12.17□□□□□ -0.46
TRAPPC3-205ENST00000462715 TRIM49BA6NDI0 452 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 MOXD2PA6NHM9 499 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SORBS3O60504 671 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 GAS7O60861 476 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 ASLP04424 464 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 PABPC4LP0CB38 370 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 EIF4BP23588 611 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SERPINB8P50452 374 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SOX10P56693 466 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 POU5F1Q01860 360 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 DHX34Q14147 1143 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 ADRM1Q16186 407 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SLC18A3Q16572 532 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 CALCRLQ16602 461 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 DGKDQ16760 1214 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 HGSNATQ68CP4 663 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 ZNF554Q86TJ5 538 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 LONP2Q86WA8 852 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 ETNPPLQ8TBG4 499 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 DDX27Q96GQ7 796 aaKnown RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 TUBGCP4Q9UGJ1 667 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 MYADML2A6NDP7 307 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 BUB1O43683 1085 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 KLRC4O43908 158 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 SHBGP04278 402 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 MMP3P08254 477 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 EN2P19622 333 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 FLT3P36888 993 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 NPEPPSP55786 919 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 BEX3Q00994 111 aa12.16□□□□□ -0.46
TRAPPC3-205ENST00000462715 KRT76Q01546 638 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms