RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 A0A1W2PQD8 194 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 FANCGO15287 622 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 INPPL1O15357 1258 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 ASAP2O43150 1006 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CUTAO60888 179 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 EFCAB14O75071 495 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 PAGE1O75459 146 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 LINC00271P0C7V0 271 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 DARSP14868 501 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 EIF4BP23588 611 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 CCT6AP40227 531 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 CLCN3P51790 818 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 PTENP60484 403 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 FAM189BP81408 668 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 MXD4Q14582 209 aaPredicted RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 EMC2Q15006 297 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 FAM187BQ17R55 369 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 KRT79Q5XKE5 535 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 ADALQ6DHV7 355 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 RINT1Q6NUQ1 792 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 EFCAB12Q6NXP0 572 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CNKSR3Q6P9H4 555 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 ZNF365Q70YC5 407 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 RSPH3Q86UC2 560 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 RTN4RL1Q86UN2 441 aaPredicted RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 TPH2Q8IWU9 490 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 RPUSD2Q8IZ73 545 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 TDHQ8IZJ6 230 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 TMEM87AQ8NBN3 555 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 MCPH1Q8NEM0 835 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 GRIN3AQ8TCU5 1115 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 PIGOQ8TEQ8 1089 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 APBB2Q92870 758 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 SCLYQ96I15 445 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 EPSTI1Q96J88 318 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CEP170P1Q96L14 293 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 TIPINQ9BVW5 301 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 STRA6Q9BX79 667 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CCDC113Q9H0I3 377 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 TMX1Q9H3N1 280 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CBX8Q9HC52 389 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 SSU72Q9NP77 194 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 DDX19AQ9NUU7 478 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 ARHGAP28Q9P2N2 729 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CFAP45Q9UL16 551 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 PCDHA7Q9UN72 937 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 ATP6V1DQ9Y5K8 247 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 TRPV2Q9Y5S1 764 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 CDY2AQ9Y6F7 541 aa6.36□□□□□ -1.39
VPS36-202ENST00000462289 SPTBN5Q9NRC6 3674 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 TDRD15B5MCY1 1934 aaKnown RBP6.36□□□□□ -1.39
VPS36-202ENST00000462289 MYO7AQ13402 2215 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 COL6A3P12111 3177 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 ZMYM2Q9UBW7 1377 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 ADGRA3Q8IWK6 1321 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 C9IYK1 514 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 GIPC1O14908 333 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 HSP90AA1P07900 732 aaKnown RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 PLCG1P19174 1290 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 GLRA2P23416 452 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CMA1P23946 247 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 TMOD1P28289 359 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 MARCKSP29966 332 aaPredicted RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 HOXA11P31270 313 aaPredicted RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 THPOP40225 353 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CCL23P55773 120 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 WDR5P61964 334 aaKnown RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 HTRA4P83105 476 aaPredicted RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 LAMTOR4Q0VGL1 99 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CAPSQ13938 189 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 SHHQ15465 462 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 XKR9Q5GH70 373 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 PPM1JQ5JR12 505 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 SRGAP1Q7Z6B7 1085 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CABP7Q86V35 215 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 FAM228AQ86W67 206 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 LRRC71Q8N4P6 559 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 DBF4BQ8NFT6 615 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 PHOSPHO2Q8TCD6 241 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 TCP11Q8WWU5 503 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 RAD54LQ92698 747 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 DNAJC19Q96DA6 116 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CHAMP1Q96JM3 812 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 SCAND2PQ9GZW5 306 aaPredicted RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 BHMT2Q9H2M3 363 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 FZD8Q9H461 694 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 CUEDC2Q9H467 287 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 ST6GALNAC4Q9H4F1 302 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 MINDY3Q9H8M7 445 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 ATP6V0A4Q9HBG4 840 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 PRDM5Q9NQX1 630 aaPredicted RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 ODF2LQ9ULJ1 636 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 NOC2LQ9Y3T9 749 aaKnown RBP6.35□□□□□ -1.39
VPS36-202ENST00000462289 COL4A3BPQ9Y5P4 624 aa6.35□□□□□ -1.39
VPS36-202ENST00000462289 EYSQ5T1H1 3165 aa6.34□□□□□ -1.39
VPS36-202ENST00000462289 COL4A4P53420 1690 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms