RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 KIAA1024Q9UPX6 916 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 ASPMQ8IZT6 3477 aa11.84□□□□□ -0.51
CBX3-205ENST00000462165 HIP1RO75146 1068 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 ZNF806P0C7X5 589 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 AARSP49588 968 aaKnown RBP eCLIP11.83□□□□□ -0.52
CBX3-205ENST00000462165 EPHB3P54753 998 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 SHC2P98077 582 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 DUSP4Q13115 394 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 GPR17Q13304 367 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 PON2Q15165 354 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 AASDHQ4L235 1098 aaPredicted RBP11.83□□□□□ -0.52
CBX3-205ENST00000462165 STXBP5Q5T5C0 1151 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 C4orf32Q8N8J7 132 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 FAM200AQ8TCP9 573 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 ZBTB45Q96K62 511 aaPredicted RBP11.83□□□□□ -0.52
CBX3-205ENST00000462165 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 C17orf75Q9HAS0 396 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 LRWD1Q9UFC0 647 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 TUBGCP4Q9UGJ1 667 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 TSC2P49815 1807 aa11.83□□□□□ -0.52
CBX3-205ENST00000462165 ZNF638Q14966 1978 aaKnown RBP11.83□□□□□ -0.52
CBX3-205ENST00000462165 ZZEF1O43149 2961 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 SDK1Q7Z5N4 2213 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 WDFY3Q8IZQ1 3526 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 CCDC163A0A0D9SF12 145 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 OR6C75A6NL08 312 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 E9PMD0 336 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 DPYSL4O14531 572 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 TOM1L1O75674 476 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 EPN2O95208 641 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 OR4Q2P0C623 313 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 HARSP12081 509 aaKnown RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 WEE1P30291 646 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 LRPAP1P30533 357 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 HOXC13P31276 330 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 RAP1GAPP47736 663 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 ALDH1A3P47895 512 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 GUCY1B3Q02153 619 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 MAPK7Q13164 816 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 PDIA5Q14554 519 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 NOLC1Q14978 699 aaKnown RBP eCLIP11.82□□□□□ -0.52
CBX3-205ENST00000462165 SF3A2Q15428 464 aaKnown RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 ZBTB6Q15916 424 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 TTC38Q5R3I4 469 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 N4BP2L1Q5TBK1 243 aaPredicted RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 CENPPQ6IPU0 288 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 GAREM2Q75VX8 874 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 HAUS6Q7Z4H7 955 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 IGSF22Q8N9C0 903 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 SNX29Q8TEQ0 813 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 GAB3Q8WWW8 586 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 PSMG2Q969U7 264 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 ZFYVE19Q96K21 471 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 PGLYRP2Q96PD5 576 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 NTPCRQ9BSD7 190 aaKnown RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 ARRDC1-AS1Q9H2J1 176 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 FOXP1Q9H334 677 aaPredicted RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 DNM3Q9UQ16 869 aa11.82□□□□□ -0.52
CBX3-205ENST00000462165 TIMM13Q9Y5L4 95 aaPredicted RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.82□□□□□ -0.52
CBX3-205ENST00000462165 SPEGQ15772 3267 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 MTMR11A4FU01 709 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 AXIN1O15169 862 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 SLC16A4O15374 487 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 FGF19O95750 216 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 CYP3A5P20815 502 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 GABRR2P28476 465 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 TRAPPC10P48553 1259 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 MCL1Q07820 350 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 ST3GAL1Q11201 340 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 STRN3Q13033 797 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 GPR158Q5T848 1215 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 RINT1Q6NUQ1 792 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 C1orf186Q6ZWK4 172 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 CACNA2D4Q7Z3S7 1137 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 DNAJB7Q7Z6W7 309 aaPredicted RBP11.81□□□□□ -0.52
CBX3-205ENST00000462165 USP37Q86T82 979 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 GPIHBP1Q8IV16 184 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 C12orf50Q8NA57 414 aaPredicted RBP11.81□□□□□ -0.52
CBX3-205ENST00000462165 TTC8Q8TAM2 541 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 BPIFB1Q8TDL5 484 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 RUSC1Q9BVN2 902 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 TIPINQ9BVW5 301 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 ATXN3LQ9H3M9 355 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 RXFP3Q9NSD7 469 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 ANKFY1Q9P2R3 1169 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 HSFX1Q9UBD0 423 aa11.81□□□□□ -0.52
CBX3-205ENST00000462165 UBQLN1Q9UMX0 589 aaKnown RBP11.81□□□□□ -0.52
CBX3-205ENST00000462165 OBSL1O75147 1896 aa11.8□□□□□ -0.52
CBX3-205ENST00000462165 TCHHQ07283 1943 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms