RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 DEFB118Q96PH6 123 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 GAD1Q99259 594 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ADAM2Q99965 735 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 EIF2AQ9BY44 585 aaKnown RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 SMYD3Q9H7B4 428 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LRRC4Q9HBW1 653 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ACP6Q9NPH0 428 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 CHST12Q9NRB3 414 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM105AQ9NUU6 356 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PARVAQ9NVD7 372 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 LCMT1Q9UIC8 334 aa4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 PACSIN2Q9UNF0 486 aaPredicted RBP4.38□□□□□ -1.71
ATP13A3-206ENST00000461660 ATMINO43313 823 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PQBP1O60828 265 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TADA3O75528 432 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 VNN1O95497 513 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PAEPP09466 180 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 VDRP11473 427 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 HSPA6P17066 643 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PROZP22891 400 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ATN1P54259 1190 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TAP1Q03518 808 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PTK7Q13308 1070 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ASTE1Q2TB18 679 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 MARCH8Q5T0T0 291 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SPOUT1Q5T280 376 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 DNAAF5Q86Y56 855 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TMEM192Q8IY95 271 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 LRRC52Q8N7C0 313 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 C1orf131Q8NDD1 294 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 LMO3Q8TAP4 145 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SH3TC2Q8TF17 1288 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF606Q8WXB4 792 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SEPT8Q92599 483 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 KCNN1Q92952 543 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM149B1Q96BN6 582 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 C18orf8Q96DM3 657 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CYFIP2Q96F07 1278 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TMEM176AQ96HP8 235 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SNX27Q96L92 541 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ZNF518BQ9C0D4 1074 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ADAMTS10Q9H324 1103 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 RSAD1Q9HA92 442 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 APOBEC3GQ9HC16 384 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 UBN1Q9NPG3 1134 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM49BQ9NUQ9 324 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 WDR35Q9P2L0 1181 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 BARX2Q9UMQ3 279 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 IPPQ9Y573 584 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PTCH2Q9Y6C5 1203 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 RBBP6Q7Z6E9 1792 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ATP8B3O60423 1300 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PTPRJQ12913 1337 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 UMODL1Q5DID0 1318 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CCDC66A2RUB6 948 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 GRID2IPA4D2P6 1211 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 B3GAT3O94766 335 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CST3P01034 146 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 EDN1P05305 212 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PDGFRBP09619 1106 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 RRM1P23921 792 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PSMA2P25787 234 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ADORA2BP29275 332 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 MLH1P40692 756 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 NDST1P52848 882 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 RWDD2BP57060 319 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 FMO1Q01740 532 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PLCB3Q01970 1234 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 ORC1Q13415 861 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PAPD7Q5XG87 772 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 MAATS1Q7Z4T9 603 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SERINC5Q86VE9 423 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM228AQ86W67 206 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SIX6OS1Q8N1H7 587 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 DDX27Q96GQ7 796 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 HAPLN2Q9GZV7 340 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 UPF3AQ9H1J1 476 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 WNT8AQ9H1J5 351 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 GOLPH3Q9H4A6 298 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CDHR5Q9HBB8 845 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PTPRHQ9HD43 1115 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TRMT13Q9NUP7 481 aaKnown RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 IP6K2Q9UHH9 426 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PADI3Q9ULW8 664 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 SMIM28A0A1B0GU29 152 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 BTNL10A8MVZ5 291 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 KPNA7A9QM74 516 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 KRT1P04264 644 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PCSK1P29120 753 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 GNL1P36915 607 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 CLDN10P78369 228 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 TSPY1Q01534 308 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 C2orf54Q08AI8 447 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 PPP1R7Q15435 360 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 AMHR2Q16671 573 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 GOLGA7BQ2TAP0 167 aa4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 FAM102AQ5T9C2 384 aaPredicted RBP4.37□□□□□ -1.71
ATP13A3-206ENST00000461660 C15orf39Q6ZRI6 1047 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms