RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 GCOM1H8Y6P7 765 aaPredicted RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 SEPT4O43236 478 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ZEB2O60315 1214 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ARIH2O95376 493 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 POLR2MP0CAP2 368 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 SCNN1BP51168 640 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 MRPS9P82933 396 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 LSAMPQ13449 338 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 OVCH1Q7RTY7 1134 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 SPATS2Q86XZ4 545 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ASB11Q8WXH4 323 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 DPF3Q92784 378 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 RMDN3Q96TC7 470 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ASPSCR1Q9BZE9 553 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ZMYND12Q9H0C1 365 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 ABHD16BQ9H3Z7 469 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 PSTPIP2Q9H939 334 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 UPF2Q9HAU5 1272 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 RIC8AQ9NPQ8 531 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 CRTAC1Q9NQ79 661 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 VPS54Q9P1Q0 977 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 DDX20Q9UHI6 824 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 OGDHLQ9ULD0 1010 aa9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 RBBP6Q7Z6E9 1792 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-212ENST00000461239 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 CCDC66A2RUB6 948 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 SMCO2A6NFE2 343 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 hCG_1984214I3L0E3 225 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 CTAGE5O15320 804 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 ADAM23O75077 832 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PROCP04070 461 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PYGMP11217 842 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 BCL6P41182 706 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 RGS19P49795 217 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 NAPAP54920 295 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PRKCQQ04759 706 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 TRAF1Q13077 416 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 MTMR1Q13613 665 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PGM5Q15124 567 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 GJC2Q5T442 439 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 VSIG10LQ86VR7 867 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 CCDC83Q8IWF9 413 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 Q8N1Y9 231 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 ZNF713Q8N859 430 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 SMARCC2Q8TAQ2 1214 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 NSUN6Q8TEA1 469 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 DIS3LQ8TF46 1054 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 FBXW5Q969U6 566 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 PGBD1Q96JS3 809 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 G6PC3Q9BUM1 346 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 B4GALT6Q9UBX8 382 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 ADD3Q9UEY8 706 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 ZHX1Q9UKY1 873 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 APOBEC2Q9Y235 224 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 CNPY2Q9Y2B0 182 aa9.1□□□□□ -0.95
ECHDC1-212ENST00000461239 STK36Q9NRP7 1315 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 ESYT2A0FGR8 921 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 MYADML2A6NDP7 307 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 FAM47E-STBD1D6RA91 191 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CPLX1O14810 134 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 DYRK3O43781 588 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 ADAMTS4O75173 837 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 DEXIO95424 95 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 AKR1A1P14550 325 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 ADCY7P51828 1080 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 RPL11P62913 178 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 TMPRSS15P98073 1019 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 SP2Q02086 613 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 MSMPQ1L6U9 139 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 ARHGEF16Q5VV41 709 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CCSAPQ6IQ19 270 aaPredicted RBP9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CCDC62Q6P9F0 684 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 C16orf59Q7L2K0 433 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 RAVER1Q8IY67 606 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CHST14Q8NCH0 376 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CRYGNQ8WXF5 182 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 TMX3Q96JJ7 454 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 IWS1Q96ST2 819 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 TRIM8Q9BZR9 551 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 BCAS3Q9H6U6 928 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 VTA1Q9NP79 307 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 ORC3Q9UBD5 711 aaPredicted RBP9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 VAV3Q9UKW4 847 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 FAM184BQ9ULE4 1060 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 CBLCQ9ULV8 474 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 PCDHA6Q9UN73 950 aa9.09□□□□□ -0.95
ECHDC1-212ENST00000461239 FRMPD3Q5JV73 1810 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 NPHS1O60500 1241 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 EIF3JO75822 258 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 PGK1P00558 417 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 TFRCP02786 760 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 COL6A1P12109 1028 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 ITGB5P18084 799 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 DNM2P50570 870 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 NKX3-2P78367 333 aa9.08□□□□□ -0.96
ECHDC1-212ENST00000461239 LRRC41Q15345 812 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms