RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 HEY2Q9UBP5 337 aa16.38■□□□□ 0.21
SSR4-206ENST00000460616 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.38■□□□□ 0.21
SSR4-206ENST00000460616 CREB3O43889 395 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 DDNO94850 711 aaPredicted RBP16.37■□□□□ 0.21
SSR4-206ENST00000460616 LYNP07948 512 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 MCL1Q07820 350 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 CNPY1Q3B7I2 92 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 Q4G0T1 1027 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 GPATCH4Q5T3I0 446 aaKnown RBP16.37■□□□□ 0.21
SSR4-206ENST00000460616 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 AGBL3Q8NEM8 1001 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 AZIN2Q96A70 460 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 FAM20AQ96MK3 541 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 POLR3CQ9BUI4 534 aaPredicted RBP16.37■□□□□ 0.21
SSR4-206ENST00000460616 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 CYP26A1O43174 497 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 TYROBPO43914 113 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 CETN2P41208 172 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 MAPK6Q16659 721 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 WDR72Q3MJ13 1102 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 CDC42EP5Q6NZY7 148 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 STXBP4Q6ZWJ1 553 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 SLC47A2Q86VL8 602 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 FAM178BQ8IXR5 827 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 ZCCHC9Q8N567 271 aaKnown RBP16.37■□□□□ 0.21
SSR4-206ENST00000460616 KAT5Q92993 513 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 OPTNQ96CV9 577 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 ZDHHC15Q96MV8 337 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 HEMGNQ9BXL5 484 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 KANSL3Q9P2N6 904 aa16.37■□□□□ 0.21
SSR4-206ENST00000460616 A0A0G2JND7 137 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 A0A1W2PPM1 405 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 CENPCQ03188 943 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 OVGP1Q12889 678 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 RASA3Q14644 834 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 RINLQ6ZS11 566 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 C1orf186Q6ZWK4 172 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 ANKS1BQ7Z6G8 1248 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 SLF2Q8IX21 1173 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 KBTBD2Q8IY47 623 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 LENG9Q96B70 501 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 MRRFQ96E11 262 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 TTC25Q96NG3 672 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FAM118BQ9BPY3 351 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 SPATA16Q9BXB7 569 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 TDRD3Q9H7E2 651 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 DDX4Q9NQI0 724 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 WDR91A4D1P6 747 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FAM86B1E9PN63 330 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 PDLIM1O00151 329 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FAM86B2P0C5J1 330 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 PLS3P13797 630 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 MAPK4P31152 587 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FMO1Q01740 532 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 NFIAQ12857 509 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 PICALMQ13492 652 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 THOC5Q13769 683 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 PCNX4Q63HM2 1172 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 GSTA5Q7RTV2 222 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FAM71AQ8IYT1 594 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 PDCD7Q8N8D1 485 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 CRYGNQ8WXF5 182 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 ADAM33Q9BZ11 813 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 FOXP3Q9BZS1 431 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 MMADHCQ9H3L0 296 aaPredicted RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 TAS2R1Q9NYW7 299 aa16.36■□□□□ 0.21
SSR4-206ENST00000460616 SCAF8Q9UPN6 1271 aaKnown RBP16.36■□□□□ 0.21
SSR4-206ENST00000460616 IGKV6D-41A0A0C4DH26 115 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 EML1O00423 815 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 MEIS2O14770 477 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 GRIN3BO60391 1043 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 LGR5O75473 907 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 GCLMP48507 274 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 PPP3CAQ08209 521 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 SEPT7Q16181 437 aaKnown RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 QRICH1Q2TAL8 776 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 P3H1Q32P28 736 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 HP1BP3Q5SSJ5 553 aaPredicted RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 DAB2IPQ5VWQ8 1189 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 SAMD7Q7Z3H4 446 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 MICALL2Q8IY33 904 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 FIZ1Q96SL8 496 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 ASCC2Q9H1I8 757 aaPredicted RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.35■□□□□ 0.211e-7■■■■■ 115.4
SSR4-206ENST00000460616 CHCHD3Q9NX63 227 aaKnown RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 ANAPC7Q9UJX3 599 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 WASF2Q9Y6W5 498 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 MSH4O15457 936 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 ESRRAP11474 423 aaPredicted RBP16.35■□□□□ 0.21
SSR4-206ENST00000460616 KRT4P19013 534 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 PIK3CAP42336 1068 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 ZBTB16Q05516 673 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 AP3B2Q13367 1082 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 CCNG2Q16589 344 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 TPH2Q8IWU9 490 aa16.35■□□□□ 0.21
SSR4-206ENST00000460616 OGFOD1Q8N543 542 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms